Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01038 ATGACCAACACAAGTGCAGAATTGTCTCAGGGAAATGGTGGTGTTTCTATTCCCCCTCCTAATTCCCAGTCTGGGCCACCTGAGCATAATCAGCGTTCTCAAAGTGGCAGCAGTGGCAATATGATTTTCAAGAGTGGACCACTTTTCATATCTTCCAAAGGAATTGGATGGACATCCTGGAAGAAAAGGTGGTTTATTTTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCAAATGCTGTCCCTCAGAAGGGAAATGAAGTGAATTTGACCCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTCGTTATCAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCTGATGTTCATGATGGACGAGCTTTCACACTTAAGGCTGAAACTACGGAGGATTTATATGAGTGGAAGACTGCACTTGAGAATGCTTTGGCACTAGCACCTAGTGCTGCCAATGTGACGGAGCAAAATGGTATCTTCAGGAACGATCAGACTGATTCAATTGATATTTCTTTGGACCAGTTGAAGGATAGAGAACCGGTCAAATCTACAGTCATTGGCCGGCCAATTTTACTTGCTTTGGAGGATGTTGATGGAACTCCATCATTTTTGGAGAAAGCCCTAACATTCATAGAAGAGCATGGAGCCAACATAGAAGGAATCTTGCGGCAAGCAGCTGATGTTGATGAGGTTGAACGTCGAGTTCGGGAATATGAACAAGGAAAAGTTGAGTTTTCTCCAGACGAGGATGCACATGTTGTTGGTGATTGTGTTAAGCATGTACTTCGCGAATTGCCATCTTCTCCAGTCCCCGCATCTTGTTGTAAGGCACTGTTAGAAGCTTGCCGAACTGAGCGTGGTAGTAGGGTTGCTGCTATGCGTGCAGCAATAAATGACACTTTCCCTGAACCAAATCGCCGCTTATTGCAAAGAATACTTACGATGATGCAAACTGTGGCTTCACGCAAAGCTGTGAATAGAATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCGCCTTTACTTCTTCGCCCCCTTCTGGCTGGAGAATGTGAAATTGAAAATGATTTTGATGTAGGTGGTGATGGTTCTGTTCAACTTTTACAAGCAGCTGCTGCAGCAAACCATGCTCAAGCAATTTGTATAACCTTATTAGAAGAATATAGCAGCATATTTGGGGAAGGTTCTGTGTCCCCTGATATATACACTGATTCAGAAGAAGAGAGTGGATCTGAGAGTGAGGAAGCAACTGATGATGATTTGTCCTATGATGATGAAGATGATTATGATGATGATGATGAACAAGATGAATCAATACATGAGTCTGATGCAGATGATGATCTTGTTAGTGAATCGTACAGCGAAACTGGAGATTCCGAGGCCGATGATGAGGACCATGGTCATGCTAGTTCAAGTTCGAAATCCTCAGGTGTGAGCGAAGATTTGAAAGCCACTCGGAAGTTATCATCAAAGTCACTTGAAGGCTCACTGACTCAACATGAAGACATCAAAAGCTCTGAACATCTCACGAGTGCAAATAAGACTGGCTATGTAGATCAGTCCAATAAGCCTGCTGATATAGTTGGAGGAGTTTCCACTGACGAAGCTACATTGCATATTTCAAATTCTCCTAGCCATTCTTCATGTATGAAAAAATCCAATACCATGTCCAATGGCCCAGCACCTCGTCATCGCACCATGTTGGGGCGCACCTCTGCAAGGAAGAATCTTTCCATGGAATCCATTGATTTTCCTATTGAAGATGAAGATGAAATTGAAAGGCTTGAAGCTGCCAGAGCAGAATTACAGACCCAAATTGACGAGGAGGTGAAGGCAAATGCAAAGCTGCAATCTCATGTGGACAAACAAAAGAAATCCTTGGAAGTGCGTCGTCTGGCTCTTGAGCAAGATGTGGCTAGACTACAGGAACAGTTGCACAAGGAAAAGAATTCTCGGGTAGCTCTTGAGAACAAAGCAGAGCTTGAGGAATTAACTCTGGTAGAAGCAGATATTGCCAACTTAGAATGGAAGGTTCAGGAGATTGGGGTGAGGCTTAATGCACAACTTGAGCGGAATCATGGAACTACTTTGGATTCCTCTAATCAACCACGGCAGATATCAAATCAGGAAAGAAAATTGAAATACAAGGCAGATGCTGAAGTTGCTGCCACATCACAGTCTGACAGATCAATAAGTAAGGGTACGGTAATGGCACAACAGGACACTCATATTGGTGGATCAGAAAATGATACCGAGAGAAAGCCTGAATCAACACCTTTACCAAACAAACACCCACCAACTAGCTCCAAGCGATCTGGTACAAAGGGTGAGGGAGCAAATTCTGCACTGACAAAACTGACATCCAGACTGAACTTTTTGAAGGTGGCCCGAAATCAGAATCAAAATGAACTCCAAAATATGGATAAAGCCCGAGACTCAAATCGCTATGCAATCAATGTGGAAAAAGGAAAAGGATCTGAACGTCCCCAATCACTTCCATCCCCCAAGCTTCCATCTCCCAAACTTCCATCCCCCCGTAGATTTGGAGGGTCTGAAGCTCAGTCTGTGCCAAACCCAGAAAAGGGTAAAGGGTCAGAGCCAGTTCAGATTTCAGAGAAAGGATCGAGCAAAGGTAAATCACATCAAAGTTCAGACAAACTGAAAAAATCAGATAGCCAGCCAGCCCATCACTCAGATGGATGGAATCAACAACCAAAACACTTGGAAAGAGGAAGGTCAGAGGGTCATAGGTCAGAGGGTCATGCGGATAGAGGAAAGTCAGAGGGTCATCAGACTTATAATGTCGATAAAGGTCGATGA 2826 0.4374 MTNTSAELSQGNGGVSIPPPNSQSGPPEHNQRSQSGSSGNMIFKSGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPNAVPQKGNEVNLTLGGIDLNNSGSVVIKADKKLLTVQFPDVHDGRAFTLKAETTEDLYEWKTALENALALAPSAANVTEQNGIFRNDQTDSIDISLDQLKDREPVKSTVIGRPILLALEDVDGTPSFLEKALTFIEEHGANIEGILRQAADVDEVERRVREYEQGKVEFSPDEDAHVVGDCVKHVLRELPSSPVPASCCKALLEACRTERGSRVAAMRAAINDTFPEPNRRLLQRILTMMQTVASRKAVNRMSSSAVAACMAPLLLRPLLAGECEIENDFDVGGDGSVQLLQAAAAANHAQAICITLLEEYSSIFGEGSVSPDIYTDSEEESGSESEEATDDDLSYDDEDDYDDDDEQDESIHESDADDDLVSESYSETGDSEADDEDHGHASSSSKSSGVSEDLKATRKLSSKSLEGSLTQHEDIKSSEHLTSANKTGYVDQSNKPADIVGGVSTDEATLHISNSPSHSSCMKKSNTMSNGPAPRHRTMLGRTSARKNLSMESIDFPIEDEDEIERLEAARAELQTQIDEEVKANAKLQSHVDKQKKSLEVRRLALEQDVARLQEQLHKEKNSRVALENKAELEELTLVEADIANLEWKVQEIGVRLNAQLERNHGTTLDSSNQPRQISNQERKLKYKADAEVAATSQSDRSISKGTVMAQQDTHIGGSENDTERKPESTPLPNKHPPTSSKRSGTKGEGANSALTKLTSRLNFLKVARNQNQNELQNMDKARDSNRYAINVEKGKGSERPQSLPSPKLPSPKLPSPRRFGGSEAQSVPNPEKGKGSEPVQISEKGSSKGKSHQSSDKLKKSDSQPAHHSDGWNQQPKHLERGRSEGHRSEGHADRGKSEGHQTYNVDKGR 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01038 941 Gene3D Rho GTPase activation protein 172 395 IPR008936 -
Pumo10g01038 941 Pfam PH domain 44 147 IPR001849 -
Pumo10g01038 941 CDD PH 44 143 - -
Pumo10g01038 941 MobiDBLite consensus disorder prediction 904 941 - -
Pumo10g01038 941 SMART PH_update 42 150 IPR001849 -
Pumo10g01038 941 MobiDBLite consensus disorder prediction 407 462 - -
Pumo10g01038 941 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 22 816 - -
Pumo10g01038 941 MobiDBLite consensus disorder prediction 1 19 - -
Pumo10g01038 941 MobiDBLite consensus disorder prediction 810 824 - -
Pumo10g01038 941 Gene3D - 29 149 IPR011993 -
Pumo10g01038 941 SMART RhoGAP_3 201 391 IPR000198 GO:0007165
Pumo10g01038 941 ProSiteProfiles PH domain profile. 41 148 IPR001849 -
Pumo10g01038 941 MobiDBLite consensus disorder prediction 1 38 - -
Pumo10g01038 941 Coils Coil 795 815 - -
Pumo10g01038 941 CDD RhoGAP 204 342 - -
Pumo10g01038 941 Coils Coil 594 621 - -
Pumo10g01038 941 MobiDBLite consensus disorder prediction 725 747 - -
Pumo10g01038 941 MobiDBLite consensus disorder prediction 880 897 - -
Pumo10g01038 941 MobiDBLite consensus disorder prediction 696 781 - -
Pumo10g01038 941 SUPERFAMILY PH domain-like 16 148 - -
Pumo10g01038 941 MobiDBLite consensus disorder prediction 765 781 - -
Pumo10g01038 941 ProSiteProfiles Rho GTPase-activating proteins domain profile. 195 394 IPR000198 GO:0007165
Pumo10g01038 941 MobiDBLite consensus disorder prediction 398 587 - -
Pumo10g01038 941 Pfam RhoGAP domain 204 347 IPR000198 GO:0007165
Pumo10g01038 941 MobiDBLite consensus disorder prediction 696 710 - -
Pumo10g01038 941 Coils Coil 626 660 - -
Pumo10g01038 941 MobiDBLite consensus disorder prediction 801 941 - -
Pumo10g01038 941 SUPERFAMILY GTPase activation domain, GAP 203 396 IPR008936 -
Pumo10g01038 941 MobiDBLite consensus disorder prediction 537 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01038 Pumo-Chr10 13461855 13474405 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01038 - - gsj:114415231 1519.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01038 10 13461855 13474405 Pumo10g01038 10 13461855 13474405 ECH