Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01037 ATGAGTCTTAAAGGATTTTTCGAAGGTGGCGTTGCTTCCATCGTTGCAGGCTGCACCACCCACCCACTCGACCTCATCAAAGTCCGCATGCAACTTCAAGAAACCCACACTCTCCGTCCAGCGTTTGCCTTTCACGCGCCCACTCCAATGCCGCCTCCCTCCGGACCCATCTCCGTCGGCGTCCGCATCGTCCAGTCGGAGGGCCTCGCCGCCCTCTTCTCCGGCGTCTCCGCCACCGTCCTCCGCCAGACGCTCTACTCCACCACCCGGATGGGCCTCTACGACGTCCTCAAGCGCCACTGGACCGACCCCGACCACGCCACCATGCCCCTCTCCCACAAGATCACCGCCGGCCTCCTTGCCGGCGGGATCGGCGCCGCCGTGGGGAACCCCGCCGACGTGGCCATGGTGCGCATGCAGGCCGACGGCTGCCTCCCGCCGGCGGAGCGGCGCAACTACAAGGGCGTGTTCGACGCGATACGGCGCATGAGTAGCCAAGAGGGGGTTGGTAGCCTGTGGCGCGGCTCAGCGCTTACGGTGAACCGCGCGATGATCGTTACGGCTTCTCAGCTGGCCTCGTACGACCAGTTTAAGGAAACCATTCTGGGACGCGGCTGGATGGAGGATGGGCTTGGGACCCACGTGGCAGCGAGTTTTGCGGCGGGTTTTGTGGCCTCGGTTGCGTCGAACCCTATTGATGTTATAAAGACTAGGGTTATGAACATGAAGGCCGAGTCTTACAATGGGGCTTTTGATTGTGCTCTCAAGACTGTTAGGGCTGAAGGACCTCTTGCCCTTTATAAGGGTTTCATCCCTACAATTTCAAGGCAGGGTCCTTTCACTGTTGTCCTCTTTGTCACCCTTGAACAAGTCAGGAAGCTGCTTAAGGAATTTTGA 897 0.5998 MSLKGFFEGGVASIVAGCTTHPLDLIKVRMQLQETHTLRPAFAFHAPTPMPPPSGPISVGVRIVQSEGLAALFSGVSATVLRQTLYSTTRMGLYDVLKRHWTDPDHATMPLSHKITAGLLAGGIGAAVGNPADVAMVRMQADGCLPPAERRNYKGVFDAIRRMSSQEGVGSLWRGSALTVNRAMIVTASQLASYDQFKETILGRGWMEDGLGTHVAASFAAGFVASVASNPIDVIKTRVMNMKAESYNGAFDCALKTVRAEGPLALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKEF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01037 298 Pfam Mitochondrial carrier protein 110 202 IPR018108 -
Pumo10g01037 298 Pfam Mitochondrial carrier protein 211 296 IPR018108 -
Pumo10g01037 298 Pfam Mitochondrial carrier protein 4 102 IPR018108 -
Pumo10g01037 298 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 100 IPR018108 -
Pumo10g01037 298 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 4 294 - -
Pumo10g01037 298 SUPERFAMILY Mitochondrial carrier 3 291 IPR023395 -
Pumo10g01037 298 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 200 IPR018108 -
Pumo10g01037 298 Gene3D Mitochondrial carrier domain 4 297 IPR023395 -
Pumo10g01037 298 FunFam Mitochondrial uncoupling protein 5 4 298 - -
Pumo10g01037 298 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 294 IPR018108 -
Pumo10g01037 298 PRINTS Mitochondrial brown fat uncoupling protein signature 206 224 IPR002030 GO:0006839|GO:0031966
Pumo10g01037 298 PRINTS Mitochondrial brown fat uncoupling protein signature 163 180 IPR002030 GO:0006839|GO:0031966
Pumo10g01037 298 PRINTS Mitochondrial brown fat uncoupling protein signature 94 106 IPR002030 GO:0006839|GO:0031966
Pumo10g01037 298 PRINTS Mitochondrial brown fat uncoupling protein signature 283 298 IPR002030 GO:0006839|GO:0031966
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01037 Pumo-Chr10 13460261 13461594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01037 1 297 Miscellaneous Gene Families AT5G09470 58.982 4.14e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01037 K15104 - gmx:100790234 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01037 10 13460261 13461594 Pumo10g01037 10 13460261 13461594 ECH