Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01035 ATGGACGTTAAGTTCGCCACCACCTTAATACTTTTCTCTGTAATCTGCCTCATCAGGGTCAATGCCATTGACCCTTGTGCCTCTCAACCGGATAATTCCGACCTCAACGTGATTCCCATCTACAGCAAATGCTCACCGTTCAAGCCACCCAAGGCAGACTCGTGGGACAACAGAATTATGAACATGGCCTCAAAAGACCCAGTCAGAGTCAAGTACCTGTCCACCTTAGTGGGCCAAAAGACCGTGTCCACGGCCCCAATCGCTTCGGGCCAGGCCTTCAACATCGGCAACTACGTGGTCAGGGTCAAATTGGGAACCCCCGGTCAACTTTTGTTCATGGTTCTCGACACCAGCACTGACGAGGCCTTCGTCCCATGCTCCGGCTGCACGGGCTGCTCCGACACCACTTTCTCGCCCAAAGCCTCAACCAGTTACGGCCCATTGGACTGCTCCATCCCGCAATGCGGTCAGGTCCGTGGGCTTTCGTGCCCCGCCACCGGAACCGGCGCGTGCTCCTTCAATCAATCCTACGCGGGCTCATCTTTCTCGGCCACCCTAGTCCAAGACTCATTAAGATTAGCCACTGATGTTATCCCAAACTACTCCTTCGGCTGTGTCAACGCCATCACCGGCGCCTCGGTTCCAGCCCAAGGGCTTTTGGGCCTGGGCCGCGGCCCATTGTCCTTGCTCTCCCAATCCGGGTCAAACTACTCGGGTATCTTCTCTTACTGCCTCCCCAGCTTCAAGTCCTACTACTTCTCCGGGTCACTCAAACTGGGGCCCGTGGGCCAGCCCAAGAGTATTCGCACCACCCCGCTTCTGCGCAACCCGCACCGTCCTTCTCTTTACTACGTGAACTTCACCGGAATCAGCGTGGGGCGCGTCCTTGTCCCCTTTCCCAGCGAGTATCTTGCGTTTAACCCGAATACCGGATCCGGAACCATAATTGATTCGGGCACGGTGATAACCCGGTTCGTGGAGCCCGTCTACAACGCGGTGAGGGATGAGTTCAGGAAGCAGGTGGGAGGCACTACATTCTCGAGCATTGGAGCTTTCGACACGTGTTTTGTGAAGACCTACGAAACACTGGCACCGGCAATTTACGCTGCACTTCGAGGGATTGGACCTGAAGCTGCCACTGGAGAACAGCTTGATCCACAGCAGCGCGGGGTCGCTGGCTTGTCTTGCAATGGCGGCGGCACCCGACAATGTGAACTCGGTGTTGAACGTCATTGCCAACTTTCAGCAACAGAACCTTAG 1260 0.5603 MDVKFATTLILFSVICLIRVNAIDPCASQPDNSDLNVIPIYSKCSPFKPPKADSWDNRIMNMASKDPVRVKYLSTLVGQKTVSTAPIASGQAFNIGNYVVRVKLGTPGQLLFMVLDTSTDEAFVPCSGCTGCSDTTFSPKASTSYGPLDCSIPQCGQVRGLSCPATGTGACSFNQSYAGSSFSATLVQDSLRLATDVIPNYSFGCVNAITGASVPAQGLLGLGRGPLSLLSQSGSNYSGIFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNFTGISVGRVLVPFPSEYLAFNPNTGSGTIIDSGTVITRFVEPVYNAVRDEFRKQVGGTTFSSIGAFDTCFVKTYETLAPAIYAALRGIGPEAATGEQLDPQQRGVAGLSCNGGGTRQCELGVERHCQLSATEP 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01035 419 Pfam Xylanase inhibitor N-terminal 98 260 IPR032861 -
Pumo10g01035 419 Gene3D Acid Proteases 76 260 IPR021109 -
Pumo10g01035 419 SUPERFAMILY Acid proteases 91 362 IPR021109 -
Pumo10g01035 419 Gene3D Acid Proteases 261 376 IPR021109 -
Pumo10g01035 419 FunFam aspartyl protease AED3 77 260 - -
Pumo10g01035 419 PANTHER ASPARTYL PROTEASES 16 358 IPR001461 GO:0004190|GO:0006508
Pumo10g01035 419 ProSiteProfiles Peptidase family A1 domain profile. 98 419 IPR033121 -
Pumo10g01035 419 Pfam Xylanase inhibitor C-terminal 283 360 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01035 Pumo-Chr10 13452686 13454408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01035 88 343 Miscellaneous Gene Families AT1G77480 30.466 2.31e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01035 - - gmx:100816307 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01035 10 13452686 13454408 Pumo10g01035 10 13452686 13454408 ECH