Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01013 ATGCTCACCTGTGCCGGTGAAGCAGATGTAGTTTTCACCAGTACTGCATCAGAAAACCCATTATTCTTGAAAGATCATGTCAAGGACCTTCCTCCTGCAAATCAAGATGTTGGAGGCCGTCGCTTTTTCATTGATATCTCTGTTCCCCGGAATGTGGGTTCATGTGTCTCAGACCTTGAGTCTGTGCGAGTTTACAATGTCGATGACCTTAAAGAGGTTGTGGCTGCCAATAAAGAGGATCGCCTAAGAAAAGCAATGGAAGCACAGGCAATCATAGCTGAAGAATCTAAGCAATTCGAAGCTTGGAGGGACTCGCTGGAAACTGTTCCCACTATTAAGAAATTGAGGGCGTATGCTGAAAGAATCAGGCTTGCTGAGCTTGAAAAATGCTTAGGTAAGATGGGTGATGATATACCAAAGAAAACACGGAGAGCTGTGGATGATCTGAGTCGGGGTATAGTGAATAAGCTGCTTCATGGTCCAATGCAACATTTAAGGTGTGATGGGAATGACAGCCGGACTCTTAGTGAGACACTGGAGAACATGCATGCTTTGAATAGGATGTTCAACCTTGAGACTGAAATATCTGTTTTGGAGCAGAAGATTCGAGCAAAGGTGGAACAAAACCAGAAATGA 636 0.4418 MLTCAGEADVVFTSTASENPLFLKDHVKDLPPANQDVGGRRFFIDISVPRNVGSCVSDLESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELEKCLGKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGNDSRTLSETLENMHALNRMFNLETEISVLEQKIRAKVEQNQK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01013 211 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 119 IPR036291 -
Pumo10g01013 211 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 85 190 IPR036453 GO:0008883|GO:0033014|GO:0050661
Pumo10g01013 211 Gene3D - 1 74 - -
Pumo10g01013 211 Pfam Shikimate / quinate 5-dehydrogenase 3 73 IPR006151 -
Pumo10g01013 211 Coils Coil 188 208 - -
Pumo10g01013 211 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 87 191 IPR015896 GO:0008883|GO:0033014|GO:0050661
Pumo10g01013 211 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01013 Pumo-Chr10 13135229 13135864 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01013 K02492 - gmx:100810957 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01013 10 13135229 13135864 Pumo10g01013 10 13135229 13135864 ECH