Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01009 ATGCTGTTTTCGGGATTGCTCTGGAGCCTTGGTTCTGTCGGAATAAAGTTGCTGGCACTGAAATTCTTGGAAACGTTTGTATTACTCTTTACATCTGACATCAGTGATACTGAGAAATTACCCACAAAAGGAATTCGGCAAGCTGTTAATGTCTCATGGTTGGTTGGTGGTCACCCTGTTCTTGATCCAGTGGTGCTCATGTCAGATGCAAATAGGACTATTGGCATTCTATTAAATTTATTGCAGTCTGTTGGCAGTCTTCGTGGTTCCTTGACTATTACTGTTGTAAATTGTTTAGCAGCCATTGCAAGGAAAAGGCCTCAACACTATGATACTATTCTTTCAGCATTGCTTGATTTTGATCCAAATTTTCAAACAGTGAAAGGATGTCATGTTGCTAGTATTCAGTACTCCTTAAGAACAGCTTTTTTGGGATTTCTTAGGTGCACTTATTCACCAATACTAGAGTCTAGAGAAAGACTAATAAGGAGCCTGCGAGCTATGAATGCGGGGGATGCTGCTGATCAGGTCATTCGGCAAGTCGACAAAATGATTAAAAATGGCGATCGTTCTACACGCGATGCACGGGTTAGCAAGGATGATCAACCATCAACTCAGTCACCTGTTTCAGGGGAATTATCTAGAAAAAGACCTGTTCCTCTAGATAATGAACAATTGGCCAATGGTCATGATGCCATCTCTAAGCGGATTCGTTCTGGTCCTGACTCTCACTCTACTTTACCAGCTCAAATAAATGATTCTGGGCAAGATCTTAACTCTGTTAATGGAGTATCAGCTAATGTTCCTGTTCTGGATAGTGAACTAACTGCTGTGGAGCAAATGATTGCTGTGATTGGTGCTTTACTTGCTGAAGGAGAGAGAGGTGCTGAATCTCTTGAAATTCTCATTTCAAAGATTCATCCTGATTTGTTGGCTGATATTGTCATAACTAATATGAAGCACTTGCCTAAGACTCCCCCACCACTAGCGAGGATTGGGAATTTACCAGTAACACGACAATTAAGCTCCCAAGTCAGTCAATCACAGGTTATATCAGCTTCTGTTCCAATAAATTCTGTCCAATCCTTGTCTAGTACTGCCCAAGCTTCATTCCCTTCAACTACGGCCACTGTCACTGCTACTGCTACTACTTCATTGCCATCTGACACCTCTAACTTCAGTAACCAGCCTGCTGATTCTAAACGTGATCCACGGCGGGATCCCCGGCGCCTGGATCCACGGCGTGTAGTGGTAACTCCTGGAGGAGCAACTGTATCAATTGCAGATGATAGTGGGGCTGCAAAATTAGAGTTTGATGAACCTGTGTCTTCCATTAAGCCTGTTTCACTTCCTGTCGTGACTGCTGATGACAATACTCCATCAGATCTAACACTCAAAATAAAAATTGATGATATTATCTCTGAAGGTTCCCCAGTTTCAGGACCTGATCAGGTAACTCCGAAAACAGAGGTTCTGGAAAAGCCTGGAGATATTCATCAGATTACAGAAGCAGATACTTCCTTGGATCCCTCACTCTCTTCTACTGATCTAAGAGATGAGGATCTGAGTACAGTGAAGCTGTCAGATGATACTGAAACAATTGGGACAGATTCATCAATTTTCGAGTTTGATCAGTTTTCTCTTGATGTTCAAGTTGAATCTACATTGGAAGATACCTGTCTGGAGTTACCACAGCTTCCACCTTATGTTGAACTATCCAAAGAACAGGAAAGTAAGGTGAAAAACATGGCTGTTAGGCGTATAATCGATTCGTACAAACATTTGCATGGGACAGATTGTCAGCAGTTTTGCATGCCACTACTTGCTCGACTAGTTGCACAGATTGATGACGACAATGAGTTTATTACGATGCTGCAAAAACACATCCTGGAAGAACACTGGCGAAAGGGGCATGAGCTTGTACTGCATGTTTTGTATCATCTGCACTCCCTCATGATAGTGGATTCAGTTGGAAATGCTTCATCTTCTGCTGTTTTATATGAAAAATTTCTCTTGGGAGTGGCAAAAACTTTGTTGGATTCTTTTCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTTGGTGAAGTCCCACTTTTGCCTGAATCGTCCTTGAATATTTTGAACGATCTCTGCTATTCTGATGTTATTGGTCATGATGGAAAAATTATCCGTGACATTGAACGTGTGACTCAAGGCCTTGGTGCTATCTGGAGTTTAATTTTGGGGCGTCCGCAAAATCGCCAAGACTGCTTAGGAATAGCATTGAAGTGTGCTGTTCACCCACAGGATGAGATTCGAGCAAAAGCTATTCGGCTGGTGACAAACAAGCTCTTTCAGCTTAGTTACATATCAGGAGATGTTGAAAATTTTGCAACAAAAATGCTGCTGTCTGCTGTAGACCATGAAGTTTCGGATACAGGTCTTCTGCAATCTGGACATACTGAACAAAGAGCCGAGGCAGAGGTTGAAAGTCATGAAATAAGTTGTACTTCACAGGTTTCAGAGTCCACAATTTCTGAAAATGACTCTGCTAGAGTTGCTAAGCCATCAATTCAAAGTCCATCTATATCGTTTTCTGAAGCTCAACGCCTCATTTCTTTATTTTTTGCTTTATGTACAAAGAAACCCAGTCTTCTTCAGGTTGTATTTAATGTGTATGGGCAAGCCCCGAAAACTGTAAAACAGGCTTTTCATCGCCACGTTCCTATTGTTGTGAGGGCATTAGGGCAATCTTATTCTGAATTGCTCCATATCATATCTGATCCACCACAAGGATGTGAAAATCTTCTGACACTGGTACTGCAAATATTGACTCAAGACACGACGCCATCTTCTGATTTGATATCTACCGTTAAACGATTATATGAAACTAAATTTAGAGATGTTACAATTCTTGTTCCATTACTGTCTTCACTTTCCAAACAAGAGGTTTTACCAATATTCCCTCAGCTTGTTGATCTTCCATTGGAAAAGTTTCAAAGAGCACTTGCTCACATACTACAGGGTTCAGCTCATACAGGTCCAGCTTTAACACCTGTAGAAGTGTTGGTTGCAATCCATGGAATTGTTCCAGAGAAGGATGGCCTTGCACTTAAGAAGATAACAGATGCTTGCTCGGCTTGTTTTGAGCAACGTACAGTGTTCACACAACAGGTTCTGGCAAAGGCATTGAACCAGATGGTTGATCAAACTCCGCTGCCTCTACTTTTCATGAGAACAGTTATTCAGGCAATTGATGCTTTTCCTGCACTGGTTGATTTTGTTATGGAGATACTCTCAAAACTTGTGTCTAGACAGGTGTGGCGTATGCCAAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACACAGCCACGTTCTTTTCATGTATTATTGCAGTTGCCACCTCAACAACTGGAAAGTGCACTCAACAGGCATACTAATCTCAGAGGTCCCCTTGCTTCTTATGCCAGCCAACCAACTGTAAAATCATCACTTAGTAGATCAACTTTAGTAGTTCTTGGTCTTGCAAATGAAACTCACGTGCAGCAACATTTGCCAACTTCGTTACACTCTTCTGACACAAGTTCTTCAGTTCATGGAGCAACTCTGACGTGA 3600 0.4161 MLFSGLLWSLGSVGIKLLALKFLETFVLLFTSDISDTEKLPTKGIRQAVNVSWLVGGHPVLDPVVLMSDANRTIGILLNLLQSVGSLRGSLTITVVNCLAAIARKRPQHYDTILSALLDFDPNFQTVKGCHVASIQYSLRTAFLGFLRCTYSPILESRERLIRSLRAMNAGDAADQVIRQVDKMIKNGDRSTRDARVSKDDQPSTQSPVSGELSRKRPVPLDNEQLANGHDAISKRIRSGPDSHSTLPAQINDSGQDLNSVNGVSANVPVLDSELTAVEQMIAVIGALLAEGERGAESLEILISKIHPDLLADIVITNMKHLPKTPPPLARIGNLPVTRQLSSQVSQSQVISASVPINSVQSLSSTAQASFPSTTATVTATATTSLPSDTSNFSNQPADSKRDPRRDPRRLDPRRVVVTPGGATVSIADDSGAAKLEFDEPVSSIKPVSLPVVTADDNTPSDLTLKIKIDDIISEGSPVSGPDQVTPKTEVLEKPGDIHQITEADTSLDPSLSSTDLRDEDLSTVKLSDDTETIGTDSSIFEFDQFSLDVQVESTLEDTCLELPQLPPYVELSKEQESKVKNMAVRRIIDSYKHLHGTDCQQFCMPLLARLVAQIDDDNEFITMLQKHILEEHWRKGHELVLHVLYHLHSLMIVDSVGNASSSAVLYEKFLLGVAKTLLDSFPASDKSFSRLLGEVPLLPESSLNILNDLCYSDVIGHDGKIIRDIERVTQGLGAIWSLILGRPQNRQDCLGIALKCAVHPQDEIRAKAIRLVTNKLFQLSYISGDVENFATKMLLSAVDHEVSDTGLLQSGHTEQRAEAEVESHEISCTSQVSESTISENDSARVAKPSIQSPSISFSEAQRLISLFFALCTKKPSLLQVVFNVYGQAPKTVKQAFHRHVPIVVRALGQSYSELLHIISDPPQGCENLLTLVLQILTQDTTPSSDLISTVKRLYETKFRDVTILVPLLSSLSKQEVLPIFPQLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPALVDFVMEILSKLVSRQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPQQLESALNRHTNLRGPLASYASQPTVKSSLSRSTLVVLGLANETHVQQHLPTSLHSSDTSSSVHGATLT 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01009 1199 MobiDBLite consensus disorder prediction 399 414 - -
Pumo10g01009 1199 Pfam Symplekin tight junction protein C terminal 961 1139 IPR022075 -
Pumo10g01009 1199 Pfam Symplekin/PTA1 N-terminal 7 176 IPR032460 -
Pumo10g01009 1199 MobiDBLite consensus disorder prediction 1179 1199 - -
Pumo10g01009 1199 MobiDBLite consensus disorder prediction 382 416 - -
Pumo10g01009 1199 MobiDBLite consensus disorder prediction 188 248 - -
Pumo10g01009 1199 MobiDBLite consensus disorder prediction 382 398 - -
Pumo10g01009 1199 Gene3D - 4 200 IPR011989 -
Pumo10g01009 1199 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 9 1198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01009 Pumo-Chr10 13088293 13112153 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01009 K06100 - gmx:100789876 2071.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01009 10 13088293 13112153 Pumo10g01009 10 13088293 13112153 ECH