Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01008 ATGAACGCGGCGTCGATGGAGACGGCGGAGGTGCTGAGGAAGACCGGCGTGATGTATAGGCATTTGGTGTGCAATAAGAATTTGACGGATGTGAAGGACAGAGGGGTTCATCAGAGGAACACAGCGTTGGAACACATTGAGCGTCATAGGCTTGATGGAATCGTTTACTTTGCGGATGATGATAATGTGTATTCTCTCGAGTTGTTTGACGCCTTGAGAGATATCAGCCGCTTTGGCACTTGGCCTGTTGCCATGCTTGCACCAAGCAAGAACAAGGCCATTTTGGAGGGTCCTGTATGCAACGCAAGCCAAGTGATTGGATGGCATACAAATGAGAAAAGTAAAAGACTTCGTAGATTTCATGTTGATATGTCTGGATTTGCATTCAACAGCACAATCTTGTGGGATCCAAAACGATGGCGACGCCCTTCTTCAAATCCCATACGACAGTTAGACACAGTGAAGGAGGGTTTTCAAGAGACCACCTTTATAGAACAATTGGTGGCAGATGAAAGTCAAATGGAAGGTTCGCCTCCTGGTTGTTCAAAAATATTGAATTGGCATCTCCATTTGGCTGCTCATAATATAGTTTACCCAAAAGGTTGGGTGCTTCAGAAAAACCTAGATGCTGTCATACCTGTCAAGTAA 648 0.4522 MNAASMETAEVLRKTGVMYRHLVCNKNLTDVKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLELFDALRDISRFGTWPVAMLAPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPSSNPIRQLDTVKEGFQETTFIEQLVADESQMEGSPPGCSKILNWHLHLAAHNIVYPKGWVLQKNLDAVIPVK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01008 215 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 209 IPR029044 -
Pumo10g01008 215 Pfam Glycosyltransferase family 43 5 191 IPR005027 GO:0015018|GO:0016020
Pumo10g01008 215 CDD GlcAT-I 5 193 IPR005027 GO:0015018|GO:0016020
Pumo10g01008 215 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 3 209 IPR005027 GO:0015018|GO:0016020
Pumo10g01008 215 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 208 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01008 Pumo-Chr10 13082067 13084976 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01008 2 215 Glycosyltransferase AT1G27600 82.243 8.67e-137 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01008 K20869 - gmx:100809892 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01008 10 13082067 13084976 Pumo10g01008 10 13082067 13084976 ECH