Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00996 ATGGCGTCTTCTAAGAGGCCAAATGTAGAGCCGAATGGGAAAGGGAAAGGGAAAGGGAAACGGCAAAAATCTTCAGGCGGTTTTTCGCCGTTGGATGTTTCTCCGGGGAGCGTCGTGTTCCGTATGCTCTGTCATGCTTCTAGAATTGGCAGTGTTATTGGCAAAGGTGGTTCCATCATATCACAAATTCGCCAAGAAAGCGGTGTGAAGGTTAAGATTGAGGAAGCTGTTCCTGGGTGCGATGAAAGGGTTATAACTATCTCGGGTTCGGATAAAGAGGCTGAAGAAGATACTGCTGAGCAGGGAAAGGAGGTTAATGATGATGATGCTGGGAGCCAGGGGAAGGAGGATGAGGAGGAGAAGGATGGTGGCGATGGCGGTGATAATGAAGATAAAGAAGAAAAGGATTCTGGTCCAGTTGAAGATTCGCACGGCGAGAAGGGGAATTCGGCTATTCGGAAGGCTATTTCACTAGTTTTTGAGAGGATGGTTGAGGGAGTAGAGGAGACAACGGAGGAGGATGAAGAAAGTAATAAATCTTCTTCCTTTTTTTTAAGGTTGCTTATTCTTACTACTCAAGTTGGATGCGTTCTAGGAAAGGGTGGTAGTGTGATAAAGAGAATGGCAGCTGAGAGTGGTGCACAGATTCGGATCCTTCCCAAAGACAAGCTTCCAGCATGTGCGTCGGCCACCGATGAGATAGTTCAGATCTCAGGAGGTGTAGAAGTTGTCAGGAAAGCTCTTCAATCTGTTTCTCATCAGCTTTTGGAAAATCCACCTCGGGATCATGAATCTGGGCCGTCGTCTCATTCATTTGGGCAATTCCCACCACACAACCGTTCTTTTGCTGCTCAAGGAGCACCTTTTGCTACTGGGCCTCACGATATTTTTCATTCTGCACCTCCTTTGATTCCCAAGTTTCATGAAGCTGCCATCCACGGTCGCACGAGGCCTTTACAGGAAATGCTTACTTTTCGTTTATTGTGTCCTGTGGAGAGGGTAGGAAATATAATTGGTAAAGGTGGAGCAATCATAAAAACCGTGCAGCAAGAGACAGCAAGTGAAATCAAGGTTTTAGAAGCCCCTCCAGATTCAGAGGACTGTGTTATTGTTATATCTGGTCCAGCGCACCCAGAGGATAGAGTATCCCCTGTGCAAGAGGCTGTATTTCGCGTGCAAACTAGAATAGCCAAGCCTATACCTGATGCCAAAGAGCATATCATGTTAGCAAGGTTTCTTGTTGCTTCCAATCAAATAGGTTGTCTCCTTGGCAAGGGTGGTTCCATCATAACTGAAATGAGGAAGAAATCAGGGGCCCATATCCGTATATTAGGAAAGGATAAGGTTCCAAAGTGTGCTTCGGAAGACGAAGAAGTAATTCAGGTAAATGGAGAAATTGAGGCAGTGCATGATGCTCTTTTGCAAATAACCACTAGATTAAAACATCATTTCTTTCGCGATTCATATCCATCTGTCAATTATCCTTCAAATTCTCCATTTCTGGATCAACTTCGTCCATTCCCACCTTATTTAGGAAGGCGGGGGCTTTCACCTCCTGGGATGTATTCTGACCTTGGTCCTCCACCTCCACATGCGGGTTTTCCTCTTGATGATCGCCCTCCTTTTTTGAATAATATACATAGATCAGGCATTCCTCCTCACATATCTGAAAGGAAGCCTTGGGGTCCTCAGGGGGTACTTGAAGGTGGCGCACCCATTGGCTTGCCAGACATTCCAGGAGGTCCTCCTAGAAGAATTTCAGGATTTGCAGGGGGGAGCCAACCAATTATCACAAGTACCACTGTTGAAGTTGTTGTTCCTCGAGCAATGGTGCCTGTAATATATGGGGAAGATGGTGAATGCCTGAAACAAATACTTCAGATCTCTGATGCAAATATTACTATTACTGATCCAAAACCTGGAGCTGTGGAAACTAAAATTATAATATCTGGAACCCCAGAGCAAACTCATGCTGCCCAAAGTCTTATTCAGGCATTTGTCATGAGTGAGAGGGAGTCTGTTTGA 2025 0.4543 MASSKRPNVEPNGKGKGKGKRQKSSGGFSPLDVSPGSVVFRMLCHASRIGSVIGKGGSIISQIRQESGVKVKIEEAVPGCDERVITISGSDKEAEEDTAEQGKEVNDDDAGSQGKEDEEEKDGGDGGDNEDKEEKDSGPVEDSHGEKGNSAIRKAISLVFERMVEGVEETTEEDEESNKSSSFFLRLLILTTQVGCVLGKGGSVIKRMAAESGAQIRILPKDKLPACASATDEIVQISGGVEVVRKALQSVSHQLLENPPRDHESGPSSHSFGQFPPHNRSFAAQGAPFATGPHDIFHSAPPLIPKFHEAAIHGRTRPLQEMLTFRLLCPVERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSEDCVIVISGPAHPEDRVSPVQEAVFRVQTRIAKPIPDAKEHIMLARFLVASNQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQITTRLKHHFFRDSYPSVNYPSNSPFLDQLRPFPPYLGRRGLSPPGMYSDLGPPPPHAGFPLDDRPPFLNNIHRSGIPPHISERKPWGPQGVLEGGAPIGLPDIPGGPPRRISGFAGGSQPIITSTTVEVVVPRAMVPVIYGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVMSERESV 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00996 674 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 175 264 IPR036612 GO:0003723
Pumo10g00996 674 MobiDBLite consensus disorder prediction 128 148 - -
Pumo10g00996 674 MobiDBLite consensus disorder prediction 86 120 - -
Pumo10g00996 674 Gene3D K Homology domain, type 1 321 399 IPR036612 GO:0003723
Pumo10g00996 674 CDD KH-I_PEPPER_rpt1_like 323 390 - -
Pumo10g00996 674 Gene3D K Homology domain, type 1 598 672 IPR036612 GO:0003723
Pumo10g00996 674 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 599 668 IPR036612 GO:0003723
Pumo10g00996 674 ProSiteProfiles Type-1 KH domain profile. 182 251 - -
Pumo10g00996 674 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 317 663 - -
Pumo10g00996 674 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 321 402 IPR036612 GO:0003723
Pumo10g00996 674 CDD KH-I_PEPPER_rpt2_like 409 480 - -
Pumo10g00996 674 ProSiteProfiles Type-1 KH domain profile. 407 476 - -
Pumo10g00996 674 SMART kh_6 36 106 IPR004087 GO:0003676
Pumo10g00996 674 SMART kh_6 598 668 IPR004087 GO:0003676
Pumo10g00996 674 SMART kh_6 406 481 IPR004087 GO:0003676
Pumo10g00996 674 SMART kh_6 181 256 IPR004087 GO:0003676
Pumo10g00996 674 SMART kh_6 321 397 IPR004087 GO:0003676
Pumo10g00996 674 ProSiteProfiles Type-1 KH domain profile. 322 389 - -
Pumo10g00996 674 Gene3D K Homology domain, type 1 407 483 IPR036612 GO:0003723
Pumo10g00996 674 Gene3D K Homology domain, type 1 179 259 IPR036612 GO:0003723
Pumo10g00996 674 MobiDBLite consensus disorder prediction 84 148 - -
Pumo10g00996 674 ProSiteProfiles Type-1 KH domain profile. 599 663 - -
Pumo10g00996 674 Gene3D K Homology domain, type 1 36 101 IPR036612 GO:0003723
Pumo10g00996 674 ProSiteProfiles Type-1 KH domain profile. 37 106 - -
Pumo10g00996 674 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 32 92 IPR036612 GO:0003723
Pumo10g00996 674 MobiDBLite consensus disorder prediction 256 277 - -
Pumo10g00996 674 CDD KH-I_PEPPER_rpt1_like 38 91 - -
Pumo10g00996 674 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 404 489 IPR036612 GO:0003723
Pumo10g00996 674 CDD KH-I_PEPPER_rpt2_like 186 252 - -
Pumo10g00996 674 Pfam KH domain 601 664 IPR004088 GO:0003723
Pumo10g00996 674 Pfam KH domain 186 251 IPR004088 GO:0003723
Pumo10g00996 674 Pfam KH domain 40 94 IPR004088 GO:0003723
Pumo10g00996 674 Pfam KH domain 324 376 IPR004088 GO:0003723
Pumo10g00996 674 Pfam KH domain 411 476 IPR004088 GO:0003723
Pumo10g00996 674 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00996 Pumo-Chr10 12889202 12894765 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00996 K21444 - gmx:100777433 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00996 10 12889202 12894765 Pumo10g00996 10 12889202 12894765 ECH