Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00983 ATGGCGGTTTCCGATAGTCCCAGCGGTGGCTCCACGCCACCTCAACAGGAACAAGCCAAGCCTCTCTCTCTCGCGGGTCCCACCGACGCTGATCTCCAACGTAACAACGAATTGGAGAAGTTCTTACTCGATTCGGGGCTCTACGAGAGCAATGAAGAATCCGCAGCGAGAAAAGAGGTTCTTCACCGCCTCGATCAGATTGTGAAAAGCTGGGTGAAGCAGTTGACGCGCCAACGTGGCTACACAGATCAGATGGTTGAGGATGCAAATGCTGTCATTTTCACTTTTGGCTCTTATAGACTAGGGGTTCATGGACCTGGAGTTGACATAGACACTTTGTGCATTGGCCCATCTTACGTGAGCCGAGAGGAAGATTTCTTCATCATTTTGCATAACATCCTGGCCGAAATGGAAGAAGTTTCTGAACTCCAACCGGTTCCTGATGCACATGTTCCAGTAATGAAATTCAAATTCCAGGGAATATCTATAGATTTGCTGTATGCAAGTATATCACTTTTGGTTGTGCCAGAAGACCTAGATATCTCACATGGTTCAGTGTTGTATGATGTTGATGAACCAACTGTTCGAAGTCTTAATGGCTGCCGGGTGGCAGATCAAATTCTTAAACTTGTTCCAAATGTTGAGCACTTCCGAACTACACTGAGATGTTTAAAGTTTTGGGCTAAAAGGCGTGGTGTTTATTCAAATGTTACTGGATTCCTTGGTGGTGTAAATTGGGCTATTTTAGTTGCTCGAATTTGCCAGCTTTACCCTAATGCAATCCCTAGTATGTTGGTTTCTCGATTCTTCAGGGTCTATACACAGTGGCGGTGGCCAAACCCTGTAATGCTATGCTCTATAGAAGAGAATGAACTGGGATTCCCTATATGGGATCCTCGTAGAAACCCCCGAGACAGATTTCACACTATGCCAATAATTACTCCTGCATACCCCTGCATGAATTCAAGCTACAATGTCTCAGCAAGCACTCTACGTGTTATGATGGAACAGTTCCGCTATGGCAATAAGATTTGTGATGAAATTGAGCTTAATAAAGCCCAGTGGAGCGCACTTTTTCAGCCTTATGTCTTTTTTGAGGCATATAAAAACTATTTGCAAGTGGACATAATTGCATCAGACACAGATGATTTGCTAGCATGGAAGGGCTGGGTAGAATCACGGTTGAGACTTCTTACCCTGAAGATAGAGCGAGATACAAATGGGATGCTGCAGTGCCATCCTTACCCACATGAGTATATAGACACATCCAAGCCTTGTGCACATTCTGCATTTTTCATGGGCTTGCAAAGAAAAGAGGGAGTAAGAGGTCAAGAGGGGCAGCAATTTGATATACGTGGGACGGTTGATGAATTCAGACAAGACATAAATAGGTACATATACTGGAAGCCAGGGATGGAAATTTTTGTTTCTCATGTTCGTCGAAAGCAACTCCCTGCATTTGTTTTTCCTGATGGTTACAAACGCACACGAATGCCAAGGCATATAAGCCATCCAGCTGAAAAAACAGGTGATGATGCCACAAAGTGCTACTCTGGGTCTGGGTCGTCTGAAAGATGCATCAAGAGGAAAAATTACCCTGAAATGGTGGATAAGAAGCCAGACAAACCAGATAAGCGGGCATCTATTAGTCCACAGAGGTTAGAACATGCTTCTCCTGAAAGTTATACTAGTAAATCAGGTGGTACAGCTCAAATGAGTATTGAGTGTACCGAAGGGGTTAGGTTAGCTGGTTCAACAACCAAGGATGCTAACATCAATTGTGAAATTAAGTCGTCTGATGCACTCCCAGGAAGTGGACTAAGCACTGAGGTAGCTGACATGCAGATTAGTGAACCAGGCTTTGTTGACACCACACATGATATGTTGGAATCAAGGAGTGTAGAAGTTCCAAATGAGAATGGAGTTGTCAATGGGGACAAAGCTCGGGATCTGGCTTTAGATTGCCTGGAAAGTGCAGAAACTGAATCTACCAACAGCTTGTCAAACTATAAAGAGGGTGACATTGATATGGATCAGCGACTAGACAAAGCGTGTAATTTCGTCAAAATGGCTGAATGTTCAGATTATGTACCAAACGCCAGCTCCCAGAACCTCAATTGTGAGCCAGATGTCAGACTCAGAAGTGTTGTATAA 2154 0.4406 MAVSDSPSGGSTPPQQEQAKPLSLAGPTDADLQRNNELEKFLLDSGLYESNEESAARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVSREEDFFIILHNILAEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCMNSSYNVSASTLRVMMEQFRYGNKICDEIELNKAQWSALFQPYVFFEAYKNYLQVDIIASDTDDLLAWKGWVESRLRLLTLKIERDTNGMLQCHPYPHEYIDTSKPCAHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQDINRYIYWKPGMEIFVSHVRRKQLPAFVFPDGYKRTRMPRHISHPAEKTGDDATKCYSGSGSSERCIKRKNYPEMVDKKPDKPDKRASISPQRLEHASPESYTSKSGGTAQMSIECTEGVRLAGSTTKDANINCEIKSSDALPGSGLSTEVADMQISEPGFVDTTHDMLESRSVEVPNENGVVNGDKARDLALDCLESAETESTNSLSNYKEGDIDMDQRLDKACNFVKMAECSDYVPNASSQNLNCEPDVRLRSVV 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00983 717 SUPERFAMILY PAP/OAS1 substrate-binding domain 212 361 - -
Pumo10g00983 717 MobiDBLite consensus disorder prediction 1 22 - -
Pumo10g00983 717 FunFam Nuclear poly(A) polymerase 4 363 479 - -
Pumo10g00983 717 SUPERFAMILY Nucleotidyltransferase 14 210 IPR043519 -
Pumo10g00983 717 Pfam Poly(A) polymerase central domain 19 360 IPR007012 GO:0043631|GO:1990817
Pumo10g00983 717 FunFam Poly(A) polymerase alpha, putative 49 205 - -
Pumo10g00983 717 MobiDBLite consensus disorder prediction 501 570 - -
Pumo10g00983 717 Pfam Poly(A) polymerase predicted RNA binding domain 364 421 IPR007010 GO:0003723|GO:0043631
Pumo10g00983 717 Pfam Poly(A) polymerase predicted RNA binding domain 426 496 IPR007010 GO:0003723|GO:0043631
Pumo10g00983 717 CDD NT_PAP_TUTase 56 211 - -
Pumo10g00983 717 Gene3D Poly(A) polymerase predicted RNA binding domain 363 479 - -
Pumo10g00983 717 PANTHER POLY A POLYMERASE 11 544 - -
Pumo10g00983 717 Pfam Nucleotidyltransferase domain 90 166 IPR002934 GO:0016779
Pumo10g00983 717 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 364 490 IPR011068 GO:0003723|GO:0016779|GO:0031123
Pumo10g00983 717 MobiDBLite consensus disorder prediction 554 570 - -
Pumo10g00983 717 MobiDBLite consensus disorder prediction 527 551 - -
Pumo10g00983 717 Gene3D Beta Polymerase, domain 2 49 205 IPR043519 -
Pumo10g00983 717 MobiDBLite consensus disorder prediction 1 30 - -
Pumo10g00983 717 Gene3D - 20 359 - -
Pumo10g00983 717 FunFam Putative poly(A) polymerase gamma 191 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00983 Pumo-Chr10 12703809 12710417 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00983 K14376 - gmx:100802620 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00983 10 12703809 12710417 Pumo10g00983 10 12703809 12710417 ECH