Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00977 ATGGACAAGCCTAAGTTGAGACAACAGGCTGTATTCATGCGAAGTTCACTCTTTGATGAGGGTTTCCTTGATGAGCAATTCATTCAGTTAGAGGAATTGCAAGACGATGTTAATCCCAATTTTGTGGAAGAAATTGTGACCCTTTTCTACAGCGACTCTGTAAGACTGATCTATAACATAGAGCGAGCACTGATGAGTAACCCACTGAATTTCACCAAGCTAGATGATTACATGCATCAATTCAAGGGTAGTTGCTCAAGCATTGGAGCAAAGAAGGTGAAAAATGAATGTACCAGATTCAGTGAATATTGCGCAGCAGAAAACTTTGAGGGATGCTTCAGGACTTTCCAACAAATCAATGTAGAGTATACGACTTTGAAGAAGAAGCTCGAGACTTACTTTCAGTTAGTAAGGGAAAGCTGCTCAAATTAA 432 0.3981 MDKPKLRQQAVFMRSSLFDEGFLDEQFIQLEELQDDVNPNFVEEIVTLFYSDSVRLIYNIERALMSNPLNFTKLDDYMHQFKGSCSSIGAKKVKNECTRFSEYCAAENFEGCFRTFQQINVEYTTLKKKLETYFQLVRESCSN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00977 143 Gene3D HPT domain 2 142 IPR036641 GO:0000160
Pumo10g00977 143 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Pumo10g00977 143 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 10 138 IPR036641 GO:0000160
Pumo10g00977 143 FunFam Histidine-containing phosphotransfer protein 4 1 143 - -
Pumo10g00977 143 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 9 138 IPR045871 GO:0000160|GO:0009927|GO:0043424
Pumo10g00977 143 Pfam Hpt domain 44 105 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00977 Pumo-Chr10 12649908 12652850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00977 K14490 - gmx:100780856 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00977 10 12649908 12652850 Pumo10g00977 10 12649908 12652850 ECH
Pumo7g00266 7 3138504 3140238 Pumo10g00977 10 12649908 12652850 ECH
Pumo4g04190 4 82811762 82813065 Pumo10g00977 10 12649908 12652850 ECH