Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00975 ATGGATGACGAGGAGAGAGAGAGGCTTCTGGAGAGGGAGAGATTGCAAATCCAGGTGATTCGCCAGCTCGATCTCGAGGATCTCGAAGTCGAAGAAGTCGATGAAGACGCCGACATCGACGACGAACCCGACGAGGAGTATGCGCTTTTCCTTTCGCAATACCATTCGCCTAGTCCTCCTCCTCCTCCCTCATCCTCCGAATTCAATTTCGATACCTACATCGCGCCTTTGCATACCTATCTCGGTGATGTCGAAGACACGCGCCACAGGACTGCTTTCTTGGACGGTGGCGCTATATTGAACCTTCCACTCTTTTGTCTCCGAGGAGTTGTACTCTTTCCTGGGGCAACTCTTCCCCTTAGAGTTATTGAACCTCGTTTGGTGGCAGCTGTTGAGAGAGCTTTAACTCAAGATGATATTCCTTATACCATTGGTGTGATTCGAATTCACAGGGATACTGCAACTCGTAGGACAAAATCAGCAAGCATTGGGACAACTGCAGAGATTCGACAAATGGGGCGTCTGGGGGATGGCTCACTGAATGTGGTTACCCGTGGACAACAACGATTTCGCCTAAGACGGACCTGGAATGATGTGGAAGGAGTGCCTTATGGAGAGATCCAAATTATTGAGGAAGATCTGCCTCTGAGAATTCCAAGGGATGCTTTTGGCAAATTAGCACCATTGAGTAATATGCCCTGTAGCCAAGCTGTCTCACATACGTTGTCTCCAAAGTATTCCCATGTTAAAATGCAAAGGTCAAAAAATGAGGAAAGTGATTCAGAACCAAATTCAGAAGAGAGTTTTGAGAGTGAGCTCTCACTGATGGAAAGGAAAATCCATCTAGCAGTTGTTGGCTCCAGTTATGTGCATGATACGATGGATGAATCAGCAAACGACAGTGACGTTAAATTCATGCACAAGTCAGATCCAGAAATTAGATCCAATCTGGATTCAAGAACTGGCAACTGTTCCACTTCTGGAAAGCAGTCATCAAAAGAAGAGCTTAATAGATGTAAAAATATATGTGCCTACCCATCTCATAAGATTTCAAAAGCATTCTTGCCCCATTGGGCATATCGGATGTTTGACTCTTATTCGCTTGCACAAAGGGTTGCAGATATGTGGAAGCGAATAGTTGGGATGCCTAACATGGATAGTCTCATTAAGAAGCCTGATGTTTTGTCATTTCACATAGCCAGTAAAATACCTGTGTCTGAGTCTACAAGGCAGGAACTTTTGGATATTGATGGCATTGCATATAGGCTGCGTAGGGAAATTGAATTACTAGAGAGTATTGATCTTATCCGGTGTAAAAGCTGCGAGACTATAATTGCAAAACGAAGTGATATGCTGGTGATGTCAAGTGAGGGTCCTCTTAGTGCATATGTGAATGCAGGTGGTTATGTGCATGAGATAATGACTCTTTACAAGGCAAATGGTTTAGCTCTCATTGGACCAGCAGTAGCAGAATACAGTTGGTTTCCCGGGTATGCGTGGACAATCGCTACTTGTGCAACATGTAAAACCCAAATGGGATGGCTTTTTACAGCCAGGAACAAAAAACTGAAACCTAGCTCTTTCTGGGGGATTCGGAGCTGTCAACTTGCAGAAGAAATGCGCCAAAACCTTTAA 1635 0.4465 MDDEERERLLERERLQIQVIRQLDLEDLEVEEVDEDADIDDEPDEEYALFLSQYHSPSPPPPPSSSEFNFDTYIAPLHTYLGDVEDTRHRTAFLDGGAILNLPLFCLRGVVLFPGATLPLRVIEPRLVAAVERALTQDDIPYTIGVIRIHRDTATRRTKSASIGTTAEIRQMGRLGDGSLNVVTRGQQRFRLRRTWNDVEGVPYGEIQIIEEDLPLRIPRDAFGKLAPLSNMPCSQAVSHTLSPKYSHVKMQRSKNEESDSEPNSEESFESELSLMERKIHLAVVGSSYVHDTMDESANDSDVKFMHKSDPEIRSNLDSRTGNCSTSGKQSSKEELNRCKNICAYPSHKISKAFLPHWAYRMFDSYSLAQRVADMWKRIVGMPNMDSLIKKPDVLSFHIASKIPVSESTRQELLDIDGIAYRLRREIELLESIDLIRCKSCETIIAKRSDMLVMSSEGPLSAYVNAGGYVHEIMTLYKANGLALIGPAVAEYSWFPGYAWTIATCATCKTQMGWLFTARNKKLKPSSFWGIRSCQLAEEMRQNL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00975 544 Gene3D - 82 210 IPR046336 -
Pumo10g00975 544 ProSiteProfiles Lon N-terminal domain profile. 102 432 IPR003111 -
Pumo10g00975 544 Pfam ATP-dependent protease La (LON) substrate-binding domain 101 431 IPR003111 -
Pumo10g00975 544 SUPERFAMILY PUA domain-like 101 431 IPR015947 -
Pumo10g00975 544 SMART lon_5 101 432 IPR003111 -
Pumo10g00975 544 CDD CRBN_C_like 436 532 IPR034750 -
Pumo10g00975 544 Gene3D Peptide methionine sulfoxide reductase. 429 544 - -
Pumo10g00975 544 FunFam Lon protease homolog 364 428 - -
Pumo10g00975 544 FunFam Blast:Protein cereblon homolog 429 544 - -
Pumo10g00975 544 ProSiteProfiles CULT domain profile. 433 540 IPR034750 -
Pumo10g00975 544 Gene3D - 364 428 - -
Pumo10g00975 544 MobiDBLite consensus disorder prediction 243 271 - -
Pumo10g00975 544 FunFam ATP-dependent protease La domain-containing protein 82 210 - -
Pumo10g00975 544 PANTHER CEREBLON 43 534 - -
Pumo10g00975 544 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 436 526 IPR004910 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00975 K11793 - gmx:100779918 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00975 10 12637113 12641057 Pumo10g00975 10 12637113 12641057 ECH