Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00973 ATGGACCGCTTGCGTCCTCGAAACCGAGCGGTCTTTTCTGGATTTACAGATGCCGAGATTGAGAAAATGGAGAAATTGTTAAGGGAACCTAAGGGGGGATCATTGGGCAGGGAATTTTACCAAAAACTGGCTGGAAGTTTCAACCATTCCACTGGTCGTGCTGGGAAGCCTATCATAAAATGGACAGAGATTGAAAGTTGGTTTCAGACTAGGCTCCAAGACTCACCGCAAGTCCCTAACAGTGAGTTGATGGTTCCTAAATGTAAGGAAGGAGAAATTATGCGAGACCCATCAGCGTTGGAATTCGAAGCAAGATCATCAAAAGATGGAGCATGGTATGATGTTGAGGCATTTCTAGCTCACAGATTTCTTAGCACAGGGGAAGCTGAAGTCCGTGTCAGATTTGTTGGATTTGGAGCTGAGGAAGATGAGTGGATCAATATTAAAGCTTCAGTACGCCAACGCTCTGTTCCTTTGGAAAACACAGAGTGTTCCAACCTGAAAATTGGAGATCCTGTCCTGTGCTTCCAGGAGAGGAGAGATCAAGCAATCTACTATGATGCTCACATTGCAGAGATCCAAAGGAGAATGCATGATATTAGAGGTTGCAGGTGTCTCATCTTAATTCGTTATGATCACGACAACAGTGAGGAAAGAGTTCGCTTGAGGAGACTTTGCCGCAGACCAAGATCTTAG 696 0.4497 MDRLRPRNRAVFSGFTDAEIEKMEKLLREPKGGSLGREFYQKLAGSFNHSTGRAGKPIIKWTEIESWFQTRLQDSPQVPNSELMVPKCKEGEIMRDPSALEFEARSSKDGAWYDVEAFLAHRFLSTGEAEVRVRFVGFGAEEDEWINIKASVRQRSVPLENTECSNLKIGDPVLCFQERRDQAIYYDAHIAEIQRRMHDIRGCRCLILIRYDHDNSEERVRLRRLCRRPRS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00973 231 Gene3D - 159 231 - -
Pumo10g00973 231 Gene3D - 97 158 - -
Pumo10g00973 231 Pfam SAWADEE domain 99 226 IPR032001 GO:0003682
Pumo10g00973 231 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 10 230 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00973 Pumo-Chr10 12613674 12616789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00973 - - gmx:100801021 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00973 10 12613674 12616789 Pumo10g00973 10 12613674 12616789 ECH