Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00958 ATGTTCCCTTCCATCCTAAATTCTAATCAATCTCGGGACCAGCAGCAACAAAAGCAAAAAGGAGAATGGTTAGCAGGAAGTTTCAAGGCAGAGAACTTTATTCCAGGACTTGTGATAGGTTTCATTTTTGGGTTGTTGTTAGATTTATCAAAGCCCAGTAGAAATCACTTGTCCAAGAAAATTTTCTCATCTACCAAACCTCAACAGCAACTCTCAGTCTCAAGCAATGGTGATCAAGAACTTAAAATGGTTCTGGTTGTTAGGCAAGACCTAAAGATGAAATCTGGAAAGATTGCATCCCAATGTGCTCATGCTGCCACTGGCATGTACGCTGAGTTAATGCAAAGTGATCGGTCTCTTTTGAGACGATGGGAACAGTGTGGCCAGCCCAAAATTGTTGTGACTTGCAGGAATCAACAAGAAATGAATAAACTGATGGAAGCAGCCGAAAGTATTGGCCTTCCTACTTTTGTTGTTGCTGATGCTGGACGAACACAGGTTTTGGCAGGATCAAAGACTGTTCTTGCTGTTGGACCTGGACCAAAATCTTCTGTGGATTCGGTGACTGGGAGATTGCCCCTGCTTTGA 588 0.4286 MFPSILNSNQSRDQQQQKQKGEWLAGSFKAENFIPGLVIGFIFGLLLDLSKPSRNHLSKKIFSSTKPQQQLSVSSNGDQELKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDRSLLRRWEQCGQPKIVVTCRNQQEMNKLMEAAESIGLPTFVVADAGRTQVLAGSKTVLAVGPGPKSSVDSVTGRLPLL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00958 195 SUPERFAMILY Peptidyl-tRNA hydrolase II 80 195 IPR023476 -
Pumo10g00958 195 MobiDBLite consensus disorder prediction 1 20 - -
Pumo10g00958 195 FunFam Peptidyl-tRNA hydrolase 2, mitochondrial 79 195 - -
Pumo10g00958 195 Gene3D Bit1 76 195 IPR023476 -
Pumo10g00958 195 NCBIfam aminoacyl-tRNA hydrolase 81 195 IPR002833 GO:0004045
Pumo10g00958 195 CDD PTH2 82 195 IPR002833 GO:0004045
Pumo10g00958 195 Pfam Peptidyl-tRNA hydrolase PTH2 81 195 IPR002833 GO:0004045
Pumo10g00958 195 PANTHER PEPTIDYL-TRNA HYDROLASE 2 13 195 IPR002833 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00958 Pumo-Chr10 12477507 12480757 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00958 K04794 - gmx:100527852 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00958 10 12477507 12480757 Pumo10g00958 10 12477507 12480757 ECH