Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00952 ATGGCTTTCACCTCCTTGCCTTCAATCAGAAACTCCATTTCATGGCCAACTATGCTTGTTCCTGACATGCCAGCTGATGACAATATTATTTCACTTGGAAATAAAGGCATCTACAAAGGGCAACGCAATATTAATAATCTCCGAGTCTTGACCAAGGCAAATGTTGCAAGTCCATCATTACCTGTGATTGCCCCACCAACACCGGAGGAACGGCCAGGAACCACCGGCGGCGGCCGCCACCACCACCACCACCACGTTGCATGGACTAGTATCCTGCAAGAGAGATGGGAAGGGGAGTTACAAGTTCAAGGACAAATACCACTATGGCTGAAAGGAACGTACCTGAGGAACGGGCCTGGCATGTGGCACATAGGGGAGTACAACTTCCGGCACCTCTTCGACGGCTACGCCACGCTGGTGAAGCTCCGGTTCCAGAACGGGCGGTTAGTGGCCGGGCACAGGCAAATAGAGTCGGAGGCGTACCGGGCGGCGAAGAAGAACCAGAAGATATGTTACCGGGAGTTTTCCGAGGTGCCTAAGGCGGCGAATTTCCTGGCCTACGTGGGGGAGCTGGCGAGCCTGTTCTCCGGTGCGTCGCTGACCGACAACGCGAACACCGGCGTGGTGAAGCTGGGCGACGGGAGGGTGGTGTGCCTCACGGAGACTCAGAAAGGGTCCATAGTTATAGACCCTGAGACGCTGGAGACGGTGGGGAAGTTTGAGTACAGTGACTCGTTGGGGGGACTCATTCACTCTGCGCACCCCATTGTCACCGATGAGGAGTTTTTGACCTTGTTGCCTGATCTGGTGAGAGCAGGCTACCTTGTCGTGAGGATGGAGCCTGGCACCAATGAGAGGAGGGTCATTGGAAGGGTCAATTGTCGGGGTGGGCCTGCACCTGGTTGGGTTCACTCTTTTCCTGTTACTCAACACTATGTTGTTGTGCCTGAAATGCCCTTGAGGTATTGTGCTCAGAATTTGCTCAAGGCTGAACCCACTCCCTTGTACAAGTTTGAGTGGCACCCTCACTCCAAAGCTTTTATGCATGTCATGTGCAAGACTAGTGGAAACATTGTGGCAAGTGTGGAAGTGCCTCTGTTTGTTACTTTCCATTTCATAAATGCGTATGAGGAGAAAGATGAAGATGGGAGGGTCACTGCGATTATTGCCGACTGTTGTGAACACAATTCAGATACTACCATTCTTGATAGGCTTAGGTTACAGAACCTTCGTTCATTTAATGGTGAAGATGTTCTACCTGATGCAAGGGTTGGTCGGTTCAGAATACCACTGGATGGAAGTCCATATGGAACATTAGAGGCAGCATTGGACCCAAATCAACATGGGAAAGGCATGGACATGTGCAGCATAAACCCTAATTATTTAGGGAAGAAATACAGATATGCATATGCATGTGGAGCACAGCGACCTTGTAACTTTCCCAACACCCTCACCAAGCTTGATTTAGAATTGAAAAAGGCTAAGAACTGGCATGAAGAAGGTGCTGTACCCTCAGAACCCTTCTTTGTGGCACGACCAGGAGCAACTGAGGAAGATGATGGCGTGGTGATCTCCATAATCAGTGAGAAAAATGGAGAAGGATATGCATTGCTGTTAGATGGTTCCACTTTTGAAGAGATTGCTAGGGCCAAGTTCCCTTATGGACTTCCATATGGGTTGCATGGATGCTGGGTTCCAAAGGAATAA 1707 0.5009 MAFTSLPSIRNSISWPTMLVPDMPADDNIISLGNKGIYKGQRNINNLRVLTKANVASPSLPVIAPPTPEERPGTTGGGRHHHHHHVAWTSILQERWEGELQVQGQIPLWLKGTYLRNGPGMWHIGEYNFRHLFDGYATLVKLRFQNGRLVAGHRQIESEAYRAAKKNQKICYREFSEVPKAANFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPETLETVGKFEYSDSLGGLIHSAHPIVTDEEFLTLLPDLVRAGYLVVRMEPGTNERRVIGRVNCRGGPAPGWVHSFPVTQHYVVVPEMPLRYCAQNLLKAEPTPLYKFEWHPHSKAFMHVMCKTSGNIVASVEVPLFVTFHFINAYEEKDEDGRVTAIIADCCEHNSDTTILDRLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGTLEAALDPNQHGKGMDMCSINPNYLGKKYRYAYACGAQRPCNFPNTLTKLDLELKKAKNWHEEGAVPSEPFFVARPGATEEDDGVVISIISEKNGEGYALLLDGSTFEEIARAKFPYGLPYGLHGCWVPKE 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00952 568 MobiDBLite consensus disorder prediction 60 82 - -
Pumo10g00952 568 Pfam Retinal pigment epithelial membrane protein 93 566 IPR004294 GO:0016702
Pumo10g00952 568 PANTHER BETA-CAROTENE DIOXYGENASE 90 566 IPR004294 GO:0016702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00952 K17913 - gmx:100814148 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00952 10 12405074 12408696 Pumo10g00952 10 12405074 12408696 ECH