Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00944 ATGTCTCAGGTTAAAACATTCCTAGTGAATGTGAATTGCTCCATTCAGAAAAGACCCTCCTATGTCTCAGACAACTCTCGCCACTACAACCTTCCACTCTTCCCTGCCTTTAAGCCACTCAAGAAAGTTCTGCCTGAAGTCCCCTTGCAAATTGATGATGTTCACAAAACCATGTCAAACACTGCAGCTAAATTACTTGACGCTTTTGTAGATTCATTCTTTGAATTTGTTGACCAACCACTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGAGGAGTTAGGTGAAGCCATACTTGTGACCAGCATCCAAGGCCAAATTCCAGATGATTTTTCAGAGGGTGTCTACATTAGAAACGGACCTAATCCACTTTTTGGAGGACTAAAATCAACAAATTCTATCTTCGGGAGGTCAAGTCACATCTGGGTGGAAGGAGAAGGAATGCTTCACGCAATTTATTTTAAAAGGTCAAGTCAAGGGATCTGGACGATCCTCTACAACAAGAAGTATGTTGAAACCGACACATACAAGCTTGAAAAGCAACGAAGCAAGCCATTGTTTCTACCGGCCATAGAAGGCGATTCATCGGCCATTTTGTCTGCTTATCTGCTAAACTGGCTGCGATTTGGCAAAGTAAACAAGTACATCAGCAACACCAATGTCTTTGAGCATTCAGGGAAGTTTTACTCGGTTGCTGAAAATCACATCCCACAAGAGATTGATATCTTTACACTGAAAACTTTAAGAAATTGGAATGTCAATGGTGCCTGGGGTTGTCCTTTTACCAGTCATCCAAAGAAGGCTCCAGGTACAGGGGAACTAGTTACATTAGGGGTTGCAGCAGTCAAACCTTTTGCCCTGCTTGGAATTATTTCTGCTGATGGAAAGAAATTGGTTCATAAAGTTGACCTCAAACTAAACAGGTGCACTCTTTGCCATGACGTAGGGGTTACACAGAGGTACAATGTGATCATGGATTTTCCACTAACCATTGATCTAAACAGACTTCTTAGAGGAGGCCCATTAATAAAGTATAATAAGGAGGAATATGCAAGGATTGGGGTAATGCCACGCTATGGTGATGCCAACTCAATCAAATGGTTTGAGGTGGAACCTAATTGCACTTTTCACATTATCAATTCTTTTGAGGATGGTCACGAGGTTGTAGTGAGGGGCTGCAGATCTCTAGATTCACTAATTCCTGGACCTGACCCGAGTTTGAAGGAATTTGAGTGGTTATCTCGTTGTTACGAGTGGCGATTGAATATGCAAACAGGAGAAGTTAAGGAGAAAGATCTCTGTGGAGCCAACATAGTTTATATGGATTTTCCAATGATCAATGGAAACTTCATAGGTATTAGAAATAGATATGCATACACACAAGTAGTTGATCCCATTGCAAGCTCTACTCAAGACGTGCCAAAATATGGAGGTTTAGCAAAGCTCTACTTTGAAGAATCATGTGCAGAGTTCTCTATGAGAGACAAAGAGCAACCTGAAGAGCCTTTAAGAGTGGAATGCCATAAGTTTGAGAAGAATACATTTTGCAGTGGGGCTGCCTTTGTCCCCAGAGATGGAGGTCTTGAAGAAGATGACGGTTGGATTGTAGCTTTTGTTCACAATGAAGATACAGACATATCTGAAGTTCATATAATTGACACAAAGAAGTTTTCTGGTGAAATGGTTGCCAAAATTACAATGCCTCACAGAGTACCATATGGATTTCACGGAGCTTTCATGCCAATTTCATTTCAAGCACAGTAG 1764 0.4144 MSQVKTFLVNVNCSIQKRPSYVSDNSRHYNLPLFPAFKPLKKVLPEVPLQIDDVHKTMSNTAAKLLDAFVDSFFEFVDQPLLPSQSNFAPVEELGEAILVTSIQGQIPDDFSEGVYIRNGPNPLFGGLKSTNSIFGRSSHIWVEGEGMLHAIYFKRSSQGIWTILYNKKYVETDTYKLEKQRSKPLFLPAIEGDSSAILSAYLLNWLRFGKVNKYISNTNVFEHSGKFYSVAENHIPQEIDIFTLKTLRNWNVNGAWGCPFTSHPKKAPGTGELVTLGVAAVKPFALLGIISADGKKLVHKVDLKLNRCTLCHDVGVTQRYNVIMDFPLTIDLNRLLRGGPLIKYNKEEYARIGVMPRYGDANSIKWFEVEPNCTFHIINSFEDGHEVVVRGCRSLDSLIPGPDPSLKEFEWLSRCYEWRLNMQTGEVKEKDLCGANIVYMDFPMINGNFIGIRNRYAYTQVVDPIASSTQDVPKYGGLAKLYFEESCAEFSMRDKEQPEEPLRVECHKFEKNTFCSGAAFVPRDGGLEEDDGWIVAFVHNEDTDISEVHIIDTKKFSGEMVAKITMPHRVPYGFHGAFMPISFQAQ 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00944 587 PANTHER BETA-CAROTENE DIOXYGENASE 94 580 IPR004294 GO:0016702
Pumo10g00944 587 Pfam Retinal pigment epithelial membrane protein 89 581 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00944 Pumo-Chr10 12280709 12284094 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00944 - - gmx:100817738 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00944 10 12280709 12284094 Pumo10g00944 10 12280709 12284094 ECH