Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00943 ATGGCAACTTCATACACGACTCTTGCACCTAAATATTGCTCCGTTCAGAAACGACCCTTTATCGTCTCACACCATCCCAGTACTTTGGAACTTTCCTCAGCCTTTAAGCCGATCTTAAGAGCGATGATACCTCAAATTCCGCTGCAAATTGATGCTTCCAAAACCTTCATAGACATTAAAACTAAATTTCTTAACGCTGTTGTGGATTCAGCATTTGAGTTTGTCAACCAGCTAGTGCTTCCATCTCAGAGTAACTTTGCTCCGGTTGAGGAGTTAGGGGAAGCCGTGCCTATCACTAACATTGAAGGCGACATACCAGATCACTTTCCAGAGGGTGTCTTCATTAGAAATGGACCAAACCCACTCTTTGGAGGATTGAAATCATCCAAGTCTATGTTGGGGAGGACAAATAGCGTTTGGGTGGAAGGAGAAGGAATGCTTCATGCTTTGTATTTCAAAAGGGAAAGTGACGGGTGCTGCACCATCGTCTACAACAACAGATATGTTGAAACTGAAACATACAAGCTTGAGAAACAAAGTACCAAGCCTTTGTTTATCCCTGCCGTAAAAGGAGATTCATTGGCCGTTTTGTCTTCTATGCTTCTAAACGGGCTGAGATTTGGACAACTGAATAAAGATTATAGCAACACCAATGTGTTTGAGCATTCAGGCAAGTTCTATTCGGTTTCGGAGAATCACATCCCACAAGAAATTGATATCTTCACACTAAATACTTTAAAATACTGGGATGTCAATGGAGCATGGAATCGTCCTTTCGCCAGTCACCCCAAGAAAGTTACAGGTACAGGAGAGCTGGTTATTTTTGGGGTAGATGCAACTAAACCTTATCTTGAAATTGGAATAGTTTCTGCTGATGGAAATGAATTGGTTCATAAAGAAGACATAAAACTAGACAGATGCTCTTTATGCCATGATATAGGTATCACAAGCAGCAGGTATATAGCGATATTGGATTTTCCACTGATAGTAGATTCAAGCAGATTACTTAGAAGAGGCCCATTAATCAAATACGACAAGGAGAAATATGCCAGGATTGGGATAATGCCTCTCTATGGTGATGCAAACTCAATCCAGTGGTTTGAGGTGGAACCTAATAGCACATTTCATATCATCAATTCCTTTGAGGATGGTCATGAGGTTGTGTTGTGGGGTTGTAGAGCATTAGATTCAATAATTCCAGGACCTGAAGATGGTCTAAATGAATCTACATTGTTCTCTCGGTGTTATGAATGGCGATTAAACATGAAAAGTGGGGAGGTTAAGGAGAAATATCTCACTGGACCAGAACAGTTTATGGATTTTCCAGTAATCAATGCAAGTTTTACAGGAATTAGGAATAGATACGGATACACCCAAGTGGTTGATCCCACAGCTAGTTATGCTGCAGGTGATTCTTTAAAACAAAGTTTCATTATTCTTCAACTATTTAACAAGACACAAGAAGAAGAGCTTATAAGGGTGGAATACCATAGGTTTGAAAGGAATGTATTTTGCACTGGATCTGCCTTTGTCCCTAAAGAAGGTGGTCTTGAAGAAGATGATGGTTGGATAATCACTTTTGTTCACAATGAAGATACCGGCATATCTCAAGTTCATATAATTGACACAAAGAAGTTTTCTGGCGAGGCAGTTGCCAAAATTACCATGCCTTTCAGAGTTCCATATGGATTTCACGGAGCTTTCATGCCAATCTCATTTTAG 1722 0.4013 MATSYTTLAPKYCSVQKRPFIVSHHPSTLELSSAFKPILRAMIPQIPLQIDASKTFIDIKTKFLNAVVDSAFEFVNQLVLPSQSNFAPVEELGEAVPITNIEGDIPDHFPEGVFIRNGPNPLFGGLKSSKSMLGRTNSVWVEGEGMLHALYFKRESDGCCTIVYNNRYVETETYKLEKQSTKPLFIPAVKGDSLAVLSSMLLNGLRFGQLNKDYSNTNVFEHSGKFYSVSENHIPQEIDIFTLNTLKYWDVNGAWNRPFASHPKKVTGTGELVIFGVDATKPYLEIGIVSADGNELVHKEDIKLDRCSLCHDIGITSSRYIAILDFPLIVDSSRLLRRGPLIKYDKEKYARIGIMPLYGDANSIQWFEVEPNSTFHIINSFEDGHEVVLWGCRALDSIIPGPEDGLNESTLFSRCYEWRLNMKSGEVKEKYLTGPEQFMDFPVINASFTGIRNRYGYTQVVDPTASYAAGDSLKQSFIILQLFNKTQEEELIRVEYHRFERNVFCTGSAFVPKEGGLEEDDGWIITFVHNEDTGISQVHIIDTKKFSGEAVAKITMPFRVPYGFHGAFMPISF 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00943 573 PANTHER BETA-CAROTENE DIOXYGENASE 92 569 IPR004294 GO:0016702
Pumo10g00943 573 Pfam Retinal pigment epithelial membrane protein 88 570 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00943 Pumo-Chr10 12268480 12275244 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00943 - - gmx:100817207 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00943 10 12268480 12275244 Pumo10g00943 10 12268480 12275244 ECH