Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00938 ATGAAAGCACCTAACTCCTTTTCAATTTCAGTGAGTCCGAGCGCCTCTAACTCTAAATGCTCAGTTCATCAGCTGGAGAACATAGATGAGAATGCTTCTGCAGATTGGCGTGCATCATCCTGTCCCCCACCTGATACTCCAACTGAATCTATGGAGTTCCTTGCTAGATCATGGAGTCTTTCAGCCATGGAACTCTCCAAAGCACTGCACAGCACCAACATTACGATCTCCACTGGTATAGAGATGCCACTTTCATGCCCTTCAGGCCACCAATTTGATACCAAGAGTTCCACTGCTTCAAAGAATTTATCTAACGGGTGTTACCCTCCATTTTCGCCAAAAGACAGTATTGAAAAGAAGGATTTACTTTTACTCCACCAAGCAATCAATCCAGAATTCCTCTCCAGTCAAAACTTGCTCAGAAATGGGCTTTACAGGAGCTTGCTAAGAGGGAGGACAATGGGTAGGTGGTTGAAAGATCAAAAGGAGAGGAAAAAGCAGGAAATTAGGACTCATAATGCTCATTTGCACGCTGCAGTATCTGTGGCTGGTGTTGCTGCTGCTATTGCAGCAGTTGCAGCTTCAACAGCATCTCCTGAAATGCCTTATGCCAACCAAAAGAACCCTCCCCTGGCTTCTGCTGCAATTGCATCTGCAGCAGCTTTAGTAGCCTCTCACTGCATTGAGATTGCAGAAGATATGGGAGCCGAACACGATCAAATCTTAACAGTTGTCAACTCTGCCATTAATGCAAAAACCAATGGAGATATAATGACTTTGACAGCCGGAGCAGCCACAGCCTTGCGAGGAGCAGCTACTCTAAAGGCAAGGCTGCAGAAGGGGCCTGGAGCTAATGCAATTCCTCTAGTTGAGGAAAAGTGTGATGAAAGCAAAGAAGTAAACATCTTGACAGCACTGGACTATGTCTTTAGAGGTGGAGAACTTCTCAAACGTACAAGAAAAGGAGCTCTTCACTGGAAGCAAGTGTCTTTCAATATAAATTCAAATTTGCAGGTTGTAGTCAAAATGAAAAGCAAGTATATGGCAGGAACATTCACGAAAAAGAAGAAATATATAGTCACCGGAGTTTGCAATGATATCCCAGCTTGGCCCGGAAGGGAGAAGGAAGACATCAATGAAAAGAGGGCATATTTTGGAATAAAAACAACAGACAGGACAATAGAATTTGAATGTGGAATTAAAGGAGACAAACAGTTCTGGCTTGAGGGGATCCAGTATATGTTGAATTGCCGTGTCAAAGTAACATTATAA 1272 0.4347 MKAPNSFSISVSPSASNSKCSVHQLENIDENASADWRASSCPPPDTPTESMEFLARSWSLSAMELSKALHSTNITISTGIEMPLSCPSGHQFDTKSSTASKNLSNGCYPPFSPKDSIEKKDLLLLHQAINPEFLSSQNLLRNGLYRSLLRGRTMGRWLKDQKERKKQEIRTHNAHLHAAVSVAGVAAAIAAVAASTASPEMPYANQKNPPLASAAIASAAALVASHCIEIAEDMGAEHDQILTVVNSAINAKTNGDIMTLTAGAATALRGAATLKARLQKGPGANAIPLVEEKCDESKEVNILTALDYVFRGGELLKRTRKGALHWKQVSFNINSNLQVVVKMKSKYMAGTFTKKKKYIVTGVCNDIPAWPGREKEDINEKRAYFGIKTTDRTIEFECGIKGDKQFWLEGIQYMLNCRVKVTL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00938 423 PANTHER EXPRESSED PROTEIN 33 418 IPR040269 -
Pumo10g00938 423 Pfam Plant pleckstrin homology-like region 314 417 IPR013666 -
Pumo10g00938 423 Pfam Auxin canalisation 44 287 IPR008546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00938 Pumo-Chr10 12228321 12232165 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00938 - - gmx:100815080 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00938 10 12228321 12232165 Pumo10g00938 10 12228321 12232165 ECH