Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00929 ATGGAGGAAGCAAAGGGAGTAGTGAAGCACGTACTCCTTGCAAAGTTCAAGGACGACATCGCTCCAGAGCGGATTGAAGAGCTCATCAAGGACTATGCCAATCTAGTCAATCTCATCCCACCCATGAAGTCATTCCATTGGGGCAAAGATATAAGTGCTGAAAACATGCATCAAGGCTTCACTCATGTCTTTGAATCAACTTTTGAGAGTACAGAAGGCGTTGCAGAGTATGTAGCTCATCCTGCCCATGTTGAATATGCAAATTTGTTCCTTTCCTGCCTGGAGAAAGTCGTTGTGATTGACTATAAGCCTACCATCGTTAACCTTTGA 330 0.4424 MEEAKGVVKHVLLAKFKDDIAPERIEELIKDYANLVNLIPPMKSFHWGKDISAENMHQGFTHVFESTFESTEGVAEYVAHPAHVEYANLFLSCLEKVVVIDYKPTIVNL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00929 109 FunFam Stress-response A/B barrel domain-containing protein HS1 1 109 - -
Pumo10g00929 109 Pfam Stress responsive A/B Barrel Domain 8 103 IPR013097 -
Pumo10g00929 109 ProSiteProfiles Stress-response A/B barrel domain profile. 8 102 IPR013097 -
Pumo10g00929 109 Gene3D - 1 109 - -
Pumo10g00929 109 SUPERFAMILY Dimeric alpha+beta barrel 8 106 IPR011008 -
Pumo10g00929 109 SMART Dabb_2 8 104 IPR013097 -
Pumo10g00929 109 PANTHER - 5 105 IPR044662 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00929 Pumo-Chr10 12117296 12118234 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00929 - - gmx:100305974 213.386