Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00927 ATGGCATCTATTAGAAGAACCTTGTCTCCTGTGCCTAGAGCTGGAAGTGTAGCAAATGGAGAAGTGTGTTCAGTAGCTTCTCCCTTGTCGAAGTCCTCGTCAAGTCCTCAGAACTTCTCACCATCGGTTGGATTGGACTACCGTGCACTTGTGTTTGGTGTTTTCTCCCCGAGGTCTTTCAGGGCTTTTGAGAGATCAAAGCCTAGAGGGCAGCTTTGGAGGAAGGTGCTTTTCCATTTTTTCATTTGTTTCATTGTCGGTGTTTCTATTGGACTCATCCCACTTGCATCAACACACATGTCCAAGAATCTCATGCCAAAGCAACAAGCCTTCTCCTTTGAGGTGATATCTGCAGTGGGAAATTTCCAGCCATTTGGAAATGTAAAGATGAATGTGACGCCATCCATTGATGTGGCTGTGAATTTTAATGCCACTTTGTATTCAGCTGCGAAAGAACCGGAACTTATAGACGAAGTGGCATATAATATATCTGATACACAAACCAGTGAAAATCCATATTTGGAGTCTCAGAAGCTTCTCATAATTGTGACCCCAACATACAATCATCTATTTCAAGCATATTACTTGCATCGCTTGTCACAGACATTAAAATTGGTCCCACCTCCCTTGTTGTGGATTGTTGTTGAGATGACTTCCCAATCTGAAGAAACTGCTGAAATCTTAAGGGGTAGTGGGATTATGTACAGGCATCTCATTTGTAAAACAAATCTAACCAATCCAAGCCATAGGAGCATTCTTCAAAGAAATGTTGCAATGGCTCACATTGAAACTCATCGCCTTGATGGAATTGTTTACTTTGCAGATGATGATAACATCTACTCAGTGGAACTCTTTCAGCATATGAGAGAAATAAGGCGATTTGGAACGTGGACTGTAGCAAGATTATCAGGGGATAAAAGAAGCATAGTCTTGCAAGGGCCCATTTGTAATGGAAGCAGAGTAATTGGATGGCACACAGATGAATCAAATGGAAAATCTAAAAGATTTCATGCTGACATGCCAGGTTTTGCCTTCAATAGTACGATACTCTGGGATCCAAAGAAGTGGCACCGCCCCACTCTTGAACCTATCAGGCAACTTGACTCGTTCAAGGAAAGTTTATGGGTTAGCACATTGATTGAGCAGGTTGTTGAAGATGAAAGTCAAATGGAGGGCTTAATGGACAACTGCTCGAAAGTTATGGTTTGGCATATTGATCTTGAATCATCTTATTCGTTCTATCCTCAGAAATGGATTGTAAAGAACAACCTAGATGCCATTGTTCATCTTCCACTTGTGTGA 1302 0.4155 MASIRRTLSPVPRAGSVANGEVCSVASPLSKSSSSPQNFSPSVGLDYRALVFGVFSPRSFRAFERSKPRGQLWRKVLFHFFICFIVGVSIGLIPLASTHMSKNLMPKQQAFSFEVISAVGNFQPFGNVKMNVTPSIDVAVNFNATLYSAAKEPELIDEVAYNISDTQTSENPYLESQKLLIIVTPTYNHLFQAYYLHRLSQTLKLVPPPLLWIVVEMTSQSEETAEILRGSGIMYRHLICKTNLTNPSHRSILQRNVAMAHIETHRLDGIVYFADDDNIYSVELFQHMREIRRFGTWTVARLSGDKRSIVLQGPICNGSRVIGWHTDESNGKSKRFHADMPGFAFNSTILWDPKKWHRPTLEPIRQLDSFKESLWVSTLIEQVVEDESQMEGLMDNCSKVMVWHIDLESSYSFYPQKWIVKNNLDAIVHLPLV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00927 433 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 179 425 IPR029044 -
Pumo10g00927 433 FunFam Glycosyltransferases 179 421 - -
Pumo10g00927 433 CDD GlcAT-I 178 408 IPR005027 GO:0015018|GO:0016020
Pumo10g00927 433 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 71 429 IPR005027 GO:0015018|GO:0016020
Pumo10g00927 433 Pfam Glycosyltransferase family 43 199 408 IPR005027 GO:0015018|GO:0016020
Pumo10g00927 433 SUPERFAMILY Nucleotide-diphospho-sugar transferases 179 424 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00927 Pumo-Chr10 12105716 12110654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00927 1 430 Glycosyltransferase AT1G27600 45.476 9.53e-123 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00927 K20869 - gmx:100808765 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00927 10 12105716 12110654 Pumo10g00927 10 12105716 12110654 ECH