Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00921 ATGGTGAATCCCTTGGTGGAACGTGCCACGAGCAGCATGCTCGTGGGCCCTGATTGGGCCTTGAACATGGAGATCTGTGACATACTCAATCGTGACCCTGGGCAAGCAAAGGATGTTGTTAAAGGTATAAAGAAGCGGATTGGAAGTAAAGTTCCTAGAGTTCAAATTATTGCACTGACTCTGCTGGAGACAATCATAAAGAATTGTGGGGACATTGTCCACATGCATGTTGCCGAGAGAGATGTTCTTCATGAGATGGTGAAAATAGTAAAGAAGAAGCCTGATTATCATGTCAGAGAGAAGATATTGATTCTTATAGATACTTGGCAAGAAGCTTTTGGAGGGCCAAGGGCAAGATATCCACAGTATTATGCAGCATACCAGGAGCTTTTGCGTGCTGGGGCAGCATTCCCTCAGAGGTCTGAGCAATCTGCTCCTGTATTCACGCCGCTACAAACACAACCATTGTCATCATACCCTCAAAATATACGAGACACTGTTGCTCGGCAAGACACAGCTGAGTCCTCAGCAGAGTCTGAGTTTCCAGCCCTAAGTTTGTCCGAAATTCAGAATGCACGTGGTATTATGGATGTTCTTGCAGAAATGCTCAATGCATTAGACCCTGGTAACAAAGAAGGGCTTCAGCAGGAAGTTATCATTGATTTAGTGGAGCAATGTCGAACATACAAGCAGAGAGTGGTACACCTTGTTAATACAACTTCGGACGAGTCACTGCTATGCCAAGGCCTAGCTCTGAATGATGATCTGCAGCGTGTCCTGGCCAAGCATGAATCCATTGCTTCAGGAACTTCTGCTTCAGCAACTTCTGCTCAAAATCATACTGAGAAACTGAAGCCTGCACCTACTGGAGCACTTGTAGATGTTGATGGTCCTTTGGTTGATATTGGAGATACTAGTAAACAAACAGATGCGAGATCGTCTTCCAGTGCTGAAGCTGGGTCTCAAACATTGAATCAGTTAATGCTTCCTGCACCCCCAACATCAAATGGATCAGCTCCCACTGCAAAGGTTGATCCCAAAGTGGACCTACTCAGTGGTGACCTACTCAGTGGTGACGACTATAACTCACCAAAAGCAGAGACTTCACTTGCTCTTGCTCCTCTAGGAGAACAGCAGCCAGTCAGCCCTATGTCTCAACAGAATGCCCTTGTTCTTTTTGATATGTTTTCTAATGGAAGCAATGCACCTAATTCTGTTAGTACCCAGCCAATTAATGTTGCTGGCCAAACCAGTTCGTTAGCTCCTCAATTTCAACAACAGACTTTCATATCTCAAGGGGTGTTTTACCCCAACGGAGGTGTGCCAAATGTGGGGTCACCTCGGTATGAGCAATCACCTTTTACGCAGAGCACAGGTCCTTCCTGGAATGGTCAGGTTGCACAGCAGCAACAGCCTCCTTCACCAGTTTATGGTACAGCAAGTGGTGGATCATTTCCGCCGCCTCCCTGGGAAGCGCAACCTACAGACAATGATAGTCCACTGCAAGTCACTCAAATGGTTATGACGCGTGTACAAAGTGGTGCACATCCTCAGGGACCTCAAGCAATGGGGCATGACCAGGCTGTTGGAATGTATATGCAGCCAAATGCTGGCCATATGTCAACGATCAATAACCATGTTCAAAGCAATCAATTAGGCATGTACCCGCAGCATATGCAGGGTGTTGCTGGTCCCTATATGGGTATGGTTTCACATCAAATGCACAATAGTCCTGTGGCTTCCATGTATCCTCAACAGATTTATGGCAACCATTTCGGAGGATATGGCTATGGCTATGGTCAGCAACCAGGGGTTCAATATGTTGAGCAGCAAATGTATGGTTTATCTATGAGAGATGATGGTCTGAGAAATTCTTACCAGGTTTCTTCTGCATCCTATGTGCCATCTGGGAAGCCTTCCAAGCCAGAAGATAAGTTATTTGGGGACCTTGTTAACATGGCAAAAGTGAAACCAAAACCTACTCCTGACCGAACTGGTAGCATGTAA 2007 0.4599 MVNPLVERATSSMLVGPDWALNMEICDILNRDPGQAKDVVKGIKKRIGSKVPRVQIIALTLLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDYHVREKILILIDTWQEAFGGPRARYPQYYAAYQELLRAGAAFPQRSEQSAPVFTPLQTQPLSSYPQNIRDTVARQDTAESSAESEFPALSLSEIQNARGIMDVLAEMLNALDPGNKEGLQQEVIIDLVEQCRTYKQRVVHLVNTTSDESLLCQGLALNDDLQRVLAKHESIASGTSASATSAQNHTEKLKPAPTGALVDVDGPLVDIGDTSKQTDARSSSSAEAGSQTLNQLMLPAPPTSNGSAPTAKVDPKVDLLSGDLLSGDDYNSPKAETSLALAPLGEQQPVSPMSQQNALVLFDMFSNGSNAPNSVSTQPINVAGQTSSLAPQFQQQTFISQGVFYPNGGVPNVGSPRYEQSPFTQSTGPSWNGQVAQQQQPPSPVYGTASGGSFPPPPWEAQPTDNDSPLQVTQMVMTRVQSGAHPQGPQAMGHDQAVGMYMQPNAGHMSTINNHVQSNQLGMYPQHMQGVAGPYMGMVSHQMHNSPVASMYPQQIYGNHFGGYGYGYGQQPGVQYVEQQMYGLSMRDDGLRNSYQVSSASYVPSGKPSKPEDKLFGDLVNMAKVKPKPTPDRTGSM 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00921 668 MobiDBLite consensus disorder prediction 268 283 - -
Pumo10g00921 668 CDD GAT_GGA-like_plant 188 266 - -
Pumo10g00921 668 MobiDBLite consensus disorder prediction 306 321 - -
Pumo10g00921 668 MobiDBLite consensus disorder prediction 442 499 - -
Pumo10g00921 668 FunFam TOM1-like protein 2 1 148 - -
Pumo10g00921 668 Gene3D - 180 277 IPR038425 -
Pumo10g00921 668 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Pumo10g00921 668 MobiDBLite consensus disorder prediction 268 321 - -
Pumo10g00921 668 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Pumo10g00921 668 CDD VHS 2 132 - -
Pumo10g00921 668 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Pumo10g00921 668 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Pumo10g00921 668 Pfam VHS domain 4 129 IPR002014 GO:0035091|GO:0043130
Pumo10g00921 668 SUPERFAMILY GAT-like domain 140 269 - -
Pumo10g00921 668 Gene3D - 1 148 IPR008942 -
Pumo10g00921 668 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Pumo10g00921 668 PANTHER TOM1-LIKE PROTEIN 1 661 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pumo10g00921 668 MobiDBLite consensus disorder prediction 448 478 - -
Pumo10g00921 668 FunFam TOM1-like protein 2 182 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00921 Pumo-Chr10 11983875 11991042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00921 - - gmx:100805762 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00921 10 11983875 11991042 Pumo10g00921 10 11983875 11991042 ECH