LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo10g00918	ATGGCGAACGAGGACTACGAAGAGCGGCAGCAGCAGCAGCAAGCGCAGGAGCTCGGGTACGACCCGAACTTCGTGCCCGACTCGGTAAAATCGTTCGTGGTCCACCTGTACCGGCACATCCGCGAGAAGAACGTGTACGAGATCCACCAGATGTACGAGAGCTCGTTCCAGACCCTCTCGGAGCGGCTCTTCAAGGACAGCCCGTGGCCCTCCGTGGACGCGGTGGCCCACTACGTGGACAACGACCACGTGTTCTGCCTCCTGTACCGCGAGATGTGGTTCCGCCACCTCTACGCCCGCCTCACGCCCACGCTGCGGCAGCGCATCGACTCCTGGGACAACTACTGCAGCCTCTTCCAGGTCGTCCTCCACGGCGTCGTCAACATGCAGCTCCCCAACCAGTGGCTCTGGGACATGGTCGACGAGTTCGTCTACCAGTTCCAGAGCTTCTGCCAGTACCGCGCCAAGATGAAGAACAAGACCGAGCAGGAGATCGCGCTCCTGCGCCAGTTCGACCAGGCCTGGAATGTTTATGGCGTTCTCAACTTCTTGCAAGCTCTGGTGGAGAAGAGTGCCATTATTCAGATTCTGGAGCAGGAGAAGGAGGGGCTCGAGCAGTTTACCGCCACCGATGGCTATGATTACAATGGAGGGAGTAATGTGTTGAAGGTGTTGGGGTATTTTAGCATGGTGGGGCTCCTTAGGGTTCATTGTTTGTTGGGGGATTATCATACCGGTCTCAAGTGCTTGCTTCCTATTGATATTAGTCAGCAAGGGGTTTATACCAGTGTTATTGGGAGTCACATCACCACTATTTATCACTATGGTTTCGCCAATCTCATGCTCCGCAGATATGTGGAAGCAATTCGTGAATTTAACAAAATTCTCTTGTACATCTTTAAGACAAAGCAGTATCATCAGAAATCGCCCCAATATGAGCAGATACTAAAGAAAAATGAACAAATGTATGCCTTGCTGGCAATTTGCCTTTCACTTTGCCCCCAAAGCAGGCTTGTTGATGAAACTGTTAACTCTCAGTTACGTGAGAAGTATGGTGAAAAGATGGTTAGAATGCAGAGATATGATGATGAGGCATTTGCTATCTATGATGAGCTCTTCTCATATGCATGCCCCAAGTTCATTACCCCTTCAGCACCTAGTTTTGAGGAGCCTCTAGTAAATTACAATCAGGATGCCTATAGACTTCAATTGAAACTGTTCCTTTATGAAGCAAAGCAACAACAGTTGTTATCAGGTGTCCGGACCTTCTTGAAAGTGTATTCAACAATCTCCCTTGCAAAACTTGCAAGTTACATGGAAGTGGATGAACCCACCTTAAGGACTATCTTGATGACATACAAGCACAAGACACATGCTGTTGATAGTGATGGGAAAATTGCATCCAATGCCGATGTAGATTTCTATATTGATGATGACACAATTCATGTTGTGGAGTCTAAGCCTGCCAAACGTTATGGGGATTACTTTTTGCGTCAGATTGTCAAGGTATGCTTCGTATGCATTCTGGTGCATAATTTTCTTATTTGCCAAGATTTCTTCATGTTTCTTGTATGA	1575	0.4819	MANEDYEERQQQQQAQELGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYESSFQTLSERLFKDSPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVYGVLNFLQALVEKSAIIQILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQSRLVDETVNSQLREKYGEKMVRMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLAKLASYMEVDEPTLRTILMTYKHKTHAVDSDGKIASNADVDFYIDDDTIHVVESKPAKRYGDYFLRQIVKVCFVCILVHNFLICQDFFMFLV	524

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo10g00918	524	ProSiteProfiles	PCI domain profile.	291	490	IPR000717	-
	Pumo10g00918	524	Hamap	Eukaryotic translation initiation factor 3 subunit L [EIF3L].	14	505	IPR019382	GO:0003743\|GO:0005737\|GO:0005852
	Pumo10g00918	524	Pfam	RNA polymerase I-associated factor PAF67	107	502	IPR019382	GO:0003743\|GO:0005737\|GO:0005852
	Pumo10g00918	524	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 3	9	503	IPR019382	GO:0003743\|GO:0005737\|GO:0005852

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo10g00918	K15029		-	gmx:100786533	994.571

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo10g00918	10	11959291	11963115	Pumo10g00918	10	11959291	11963115	ECH