Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00908 ATGGGTTACATCCACTATGGAAGACAAAGTCTCAGGCACATATTCAGATTCAGAACCGCCACCGGCGTGGTCACAAACTCCGCGAGATCGCAATCGCGCACTGCATTCCCCTCCCATTCCCCCATCCTCGGCAGCAACGCGCTCTTCTCCACCACTTCCGACGCCAGAATCGTGCAGGAGATTCTGGCGGAGGTGGAGCGCGACAGGCTCAGGGAGCGAAACGAGCGTTTGCGACTCGGCCTAGACACCGCCGACATCGACGCTGAATCCGAGCAGGACTACATGGGCGTGGGCCCCCTCATCGCGAAGCTCGAGAAGGAGAAGCTCAAGGACTCCCCCGACCTGAACCGCTACGAGGAGCCCACCGACTCCGACGACGACTCCGACGAAGAAACCAAGGACGAGGCCGACAAGAGGACCATAGACTTCGGCAAGAAATTCAAGAAGCACGAGGAGCTTCTCGGGAACTTCACCAAAGCCGAAACCCTAGACGACGCGTTCAAGTGGATGACCAAAATAGACGTGTTCGAAAACAAGCATTTCCGCCTCCGCCCCGAGTATAGGGTTATCGGCGAGCTCGTGAATCGGCTCAAAGTAGCGACGGAGCAGAAGGATAAGTTTGTTCTGCAGAATAAGCTTAATAGGGCGCTGAGGTTGGTGCGGTGGAAGGAGGCTTATGATCCTGATAACCCTGCCAATTATGGTGTCATTCAGCGAGAGCAGCCGGCCGCGGATGCGCGGGAAGAGGCTGAGTTGGAGAAGGAGAAGCAGAAGCAGATTGAGGAGGGAGATAATGCTGCTGCTGCTGATGATGATGATGAGCAGGAGTTTGATGACATGAAGGAGAAGGATAATATACTGCTGGCCAAACTCGAGGCTATTGATAGGAAGCTCGAGGAGAAGTTGGCGGAGCTCGAGTATACGTTTGGGAGGAAAGGGAAGGCGCTGGAGGAAGAGATCAAGGATCTTGCTGAGGAGAGAAATGAGTTGACTGAGGAGAAGAGAAAGCCTCTTTACCGGAAGGGTTTTGATACAAGATTGATAGACATGAACCGAACTTGTAAAGTCACAAAGGGAGGACAAGTTGTGAAGTATACTGCTATGGTAGCTTGTGGCAACTATAATGGTGTTATTGGTTTTGCAAAAGCCAAAGGCCCTGCAGTCCCAGTTGCCCTTCAGAAGGCGTACGAGAAATGCTTTCAGAATTTGCATTATGTGGAGCGACATGAGGAGCATACAATTGCACATGCAGTACAAACGTCTTATAAAAAGACCAAGGTGTATCTCTGGCCTGCTCCCACTACAACTGGCATGAAAGCTGGCAGAACAGTCGAAGCCATTCTGCATTTAGCTGGTTTAAAGAATGTCAAGTCGAAGGTCATTGGTTCCAGAAATCCTCATAATACAGTTAAGGCTGTCTTCAAAGCACTTAATGCGATTGAGACGCCAAGGGATGTCCAAGAGAAGTTTGGCAGGACTGTGGTTGAGAAGTATCTGTTGTGA 1503 0.5116 MGYIHYGRQSLRHIFRFRTATGVVTNSARSQSRTAFPSHSPILGSNALFSTTSDARIVQEILAEVERDRLRERNERLRLGLDTADIDAESEQDYMGVGPLIAKLEKEKLKDSPDLNRYEEPTDSDDDSDEETKDEADKRTIDFGKKFKKHEELLGNFTKAETLDDAFKWMTKIDVFENKHFRLRPEYRVIGELVNRLKVATEQKDKFVLQNKLNRALRLVRWKEAYDPDNPANYGVIQREQPAADAREEAELEKEKQKQIEEGDNAAAADDDDEQEFDDMKEKDNILLAKLEAIDRKLEEKLAELEYTFGRKGKALEEEIKDLAEERNELTEEKRKPLYRKGFDTRLIDMNRTCKVTKGGQVVKYTAMVACGNYNGVIGFAKAKGPAVPVALQKAYEKCFQNLHYVERHEEHTIAHAVQTSYKKTKVYLWPAPTTTGMKAGRTVEAILHLAGLKNVKSKVIGSRNPHNTVKAVFKALNAIETPRDVQEKFGRTVVEKYLL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00908 500 SUPERFAMILY dsRNA-binding domain-like 338 408 - -
Pumo10g00908 500 PANTHER RIBOSOMAL S SUBUNIT 126 496 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pumo10g00908 500 Pfam Ribosomal protein S5, C-terminal domain 422 489 IPR005324 GO:0003735|GO:0005840|GO:0006412
Pumo10g00908 500 FunFam 30S ribosomal protein S5 408 499 - -
Pumo10g00908 500 Coils Coil 243 263 - -
Pumo10g00908 500 Gene3D - 408 497 IPR014721 -
Pumo10g00908 500 Coils Coil 288 308 - -
Pumo10g00908 500 ProSiteProfiles S5 double stranded RNA-binding domain profile. 343 406 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pumo10g00908 500 MobiDBLite consensus disorder prediction 111 137 - -
Pumo10g00908 500 Coils Coil 313 336 - -
Pumo10g00908 500 Pfam Ribosomal protein S5, N-terminal domain 343 407 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pumo10g00908 500 Gene3D - 294 404 - -
Pumo10g00908 500 FunFam 30S ribosomal protein S5 293 404 - -
Pumo10g00908 500 MobiDBLite consensus disorder prediction 242 265 - -
Pumo10g00908 500 SUPERFAMILY Ribosomal protein S5 domain 2-like 412 490 IPR020568 -
Pumo10g00908 500 MobiDBLite consensus disorder prediction 241 278 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00908 K02988 - gmx:100800084 835.869