Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00905 ATGGTAGAAGCAGGGGAAGAGGAGGTTATTGAATTCGAGTGGGGCAAAAGGAAAGGGATGGGTGGTAGGAAGAAGGATGTGCAATTTTACGAATCGTTTACCTATGATGGTGTGGAATACTCTCTCTTTGACTCTGTGTTTCTCTACAAGGAAGGTGAACCCGAGCATTACATTGGTAAAATCGTTAAAATATGGGAGAACTCTGATAAGAGCAGGAAAGTTAAGATTCTGTGGTATTTTCGTCCTTCTGAGATTTTGAATTTCTTGGAAGGAAGTGAGACACTTGAGAATGAGTTGTTTCTGGCATCTGGTGAAGGCGAAGGGCTTGTAAACGTCAATCCTCTGGAAGCTATTGCTGGCAAATGCAATATTGTTTGCATCTTGAAGGATAGCAGGAATCCATATCCATCAGATGAAGAAGTTCAAATGGCTGAATTTGTATTCTATCGTTTCTTTGATGTTGGGAAGCGTAAAATATTGGACAAGATAGATGATAAAATTGCTGGAATTGAAGTTAAAAATATTTTTAACAATTTAGATAGTCAAAAGCTTGTTGGTCTTGTGAAACCTGGTTTAGACAAGAAAGAAGTTAGCAGGAACTTCATGGCATGTAATGAAGCGGTGGCTCTTTCGAGCCAAAAAAACAGTCAGCCTTTAATTGAAAAACCAGATGGCAAGTGTTTTGACACATTAGTTAGAGAAAATGCTGATTCTAAGTCATTGTTGGGGAAAAAACCTACTTGTAGCACTGATGTAAAGGAAGCAAGTAAACCTGCTAATGCTTTGCACACTACTTCCAACAAGAAGACTGTGCCTCAAGCTAAAGTTGAAGAAAATAGGGGTTGTAAGGATTCTTTGGTTAAACAAAAATCATTAGCTAAACTATCACATGGTTCTATTGCTGGTTTGGAAATGAGGGAAATAGCTAAAATGGATGATGGGAGTGGAAATGGCTCTATTGAGAAGAACATTTTGATGTCTAGGGTTGATTCAAAAAGGGATGATCGCGAGGGTGTTGGTGTCCCGATTGGACAAATTAAAAAGGGATTAGAGGAGGAAAAGGCTTCCAAGAAGGAAAAACGTGGTGGTTTTGGTAAGGTTTCTAGTGCGAAGATGAATAATAATGGGCAAAATCGAAGGCTTATTACCTATGACGATGACGAAGATGATGATGTGAAGACTATAGCTCCATCTTCATCAAAGGATAAATATAAGGTTCAACGGGCAATGGATTCTTGTGATGTGGAGGAACTCCCTTCCAAGAAGTTAAAGATTGACAAGAAGCCAAAAAAACTCACTAGTGACAAGTTGTGCAAAGAATCTTCAATGATTTCACCGAATGTGGAACACAAGCTAGATTTTCGTCCAATGGAAGTTACTCAAAGACCAGATGATGAGGATAGAAGCAAATGGTTTAAGGAAATTCCTTGGGAAGAAAAAATGAAAACTGCTTATGAGCAAGGAAGGCTTGTGCTACTTCAAAACTTGGATCCATCTTTATCTTCATCAGAGGTACAGAATATTATTTGGACTGCCTTTAAAGAAAGCTGCACTGCAAAGGTGATCCAGAAAACTGCCTACTCTAGCCCTCATTCTGGTCAAGCTTATGTTATATTTAAAAAAAGTGAAGCAGCAGAGTTGGTTGTTAGAAAATTAGACGAGGGCTGTTTCTTAATGTCAAATGGGCGACCCCTTGTTGGAAGCTTTGGAGTTCCTTGCTTTCCAAAAAAGAAGCCAATATTTTATGGTCATCATGTTGTTGATCAACTTCGATTGATGCAAATGCGACGAGAGATGAAAGATGTTGTATCTACTTCACATTGTTCTCAGCCCAACAATATTGAATATGATATGGGCATAGAGTGGTGCTTACTGCAAGAAAGAGCAAACAAATCATGGAGAAAGTTGTATCAGCGACAAGGTGAGGAGTTGAGTAAACTCAGAGCTAAGCTGAAGTCTAAAATTTAA 1968 0.3877 MVEAGEEEVIEFEWGKRKGMGGRKKDVQFYESFTYDGVEYSLFDSVFLYKEGEPEHYIGKIVKIWENSDKSRKVKILWYFRPSEILNFLEGSETLENELFLASGEGEGLVNVNPLEAIAGKCNIVCILKDSRNPYPSDEEVQMAEFVFYRFFDVGKRKILDKIDDKIAGIEVKNIFNNLDSQKLVGLVKPGLDKKEVSRNFMACNEAVALSSQKNSQPLIEKPDGKCFDTLVRENADSKSLLGKKPTCSTDVKEASKPANALHTTSNKKTVPQAKVEENRGCKDSLVKQKSLAKLSHGSIAGLEMREIAKMDDGSGNGSIEKNILMSRVDSKRDDREGVGVPIGQIKKGLEEEKASKKEKRGGFGKVSSAKMNNNGQNRRLITYDDDEDDDVKTIAPSSSKDKYKVQRAMDSCDVEELPSKKLKIDKKPKKLTSDKLCKESSMISPNVEHKLDFRPMEVTQRPDDEDRSKWFKEIPWEEKMKTAYEQGRLVLLQNLDPSLSSSEVQNIIWTAFKESCTAKVIQKTAYSSPHSGQAYVIFKKSEAAELVVRKLDEGCFLMSNGRPLVGSFGVPCFPKKKPIFYGHHVVDQLRLMQMRREMKDVVSTSHCSQPNNIEYDMGIEWCLLQERANKSWRKLYQRQGEELSKLRAKLKSKI 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00905 655 MobiDBLite consensus disorder prediction 246 277 - -
Pumo10g00905 655 SMART BAH_4 38 164 IPR001025 GO:0003682
Pumo10g00905 655 CDD RRM_SF 491 565 - -
Pumo10g00905 655 MobiDBLite consensus disorder prediction 333 365 - -
Pumo10g00905 655 Gene3D - 8 162 IPR043151 -
Pumo10g00905 655 ProSiteProfiles BAH domain profile. 38 163 IPR001025 GO:0003682
Pumo10g00905 655 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 489 572 IPR000504 GO:0003723
Pumo10g00905 655 SUPERFAMILY RNA-binding domain, RBD 481 566 IPR035979 GO:0003676
Pumo10g00905 655 Pfam BAH domain 44 125 IPR001025 GO:0003682
Pumo10g00905 655 FunFam Bromo-adjacent homology (BAH) domain-containing protein 8 159 - -
Pumo10g00905 655 PANTHER PROTEIN ANTI-SILENCING 1 2 654 - -
Pumo10g00905 655 MobiDBLite consensus disorder prediction 333 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00905 Pumo-Chr10 11765645 11780721 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00905 - - aprc:113865076 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00905 10 11765645 11780721 Pumo10g00905 10 11765645 11780721 ECH