Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00888 ATGGCAACCCTGGCTGATCAACCAAGAGCCACAGGATCCTACACCTATGGAACCTCCTATGGAGGCCCCTATGGAACCACCTATGAGCCCAACACCAGCATTAACAACCCTCCTTCACGCCAAACCGTCAAGTTCATAACTGCTGCCACTATTGGCATCACACTCTTGCTCCTGTCAGGGTTGACCCTCACAGGCACTGTCATAGGTTTGATCATTGCAACCCCTCTCCTTGTTATCTTCAGCCCCATCCTTGTCCCAGCAGCCTTTGTGCTGTTCCTAGTTGCTTGTGGCTTCTTGTTCTCTGGGGGCTGTGGTGTGGCTGCCATTGCTGCTTTGTCTTGGATTTACAACTATGTGGCTGGGAACCAGCCTGCGGGTTCTGACACCCTTGACTATGCAAAAGGGTACCTTGTTGATAAGGCAAGGGATGTGAAGGAAAGGGCAAAGGATTATGGAAATTATGCTCAGGGTAGAATTCATGAGGCCACACAAGGAGCTTATTAA 504 0.502 MATLADQPRATGSYTYGTSYGGPYGTTYEPNTSINNPPSRQTVKFITAATIGITLLLLSGLTLTGTVIGLIIATPLLVIFSPILVPAAFVLFLVACGFLFSGGCGVAAIAALSWIYNYVAGNQPAGSDTLDYAKGYLVDKARDVKERAKDYGNYAQGRIHEATQGAY 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00888 167 PANTHER OLEOSIN 35 161 IPR000136 GO:0012511|GO:0016020
Pumo10g00888 167 Pfam Oleosin 41 152 IPR000136 GO:0012511|GO:0016020
Pumo10g00888 167 ProSitePatterns Oleosins signature. 65 87 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00888 Pumo-Chr10 11624202 11624796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00888 35 158 Lipid Metabolism Gene Families AT2G25890 57.258 1.38e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00888 - - gmx:100301903 248.44