Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00885 ATGGTTTTCTGGGTTTTTGGCTATGGTTCACTGGTGTGGAACCCTGGATTCGATTACGATGAGAAAATTATTGGTTACATTAAGGACTACAGACGCGTGTTTGATTTAGCGTGCATTGATCACCGGGGAACACCCGAAAACCCAGCAAGAACTTGCACATTGGAGGAGAAAGAAGGGGCTATTTGCTGGGGAGCTGCTTATTGTATTCGAGGAGGCCCTGAAAAGGAAAAATTGGCTATGCAGTATTTGGAGCGACGGGAATGTGAATATGACCGAAAGACTCTTGTAAACTTCTTCAAGGAAGGAGATTCACTGCACCCTACTCTAACTGATGTAATAGTATTCACATCTACTCCAGACAAAGTGAACAACAAATACTACCTTGGACCTGCTCCACTTGAAGACATGGCTAGGCAAATAGCAACTGCATATGGCCCTTGCGGAAACAACAGGGACTATATTTTCCTTCTAGAAAAGGCCATGTATGATATTGGCCATGAGGATGACTTAGTGATAGAGCTTGCGAATGAAGTGAGGAAAGTACTTGGAGTGGGAAATGTAGTAGCAAAGGAAAAGAAACTGGTTGGAGCAGCACAACTTCCACACCCTCTTCATGTACCGATCCCTACCCTTCAACTGCACCCACTGCCAGAACCTATTGCTTTGGATAGTTGA 675 0.4444 MVFWVFGYGSLVWNPGFDYDEKIIGYIKDYRRVFDLACIDHRGTPENPARTCTLEEKEGAICWGAAYCIRGGPEKEKLAMQYLERRECEYDRKTLVNFFKEGDSLHPTLTDVIVFTSTPDKVNNKYYLGPAPLEDMARQIATAYGPCGNNRDYIFLLEKAMYDIGHEDDLVIELANEVRKVLGVGNVVAKEKKLVGAAQLPHPLHVPIPTLQLHPLPEPIALDS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00885 224 Gene3D - 2 173 - -
Pumo10g00885 224 FunFam Gamma-glutamylcyclotransferase 2 185 - -
Pumo10g00885 224 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 2 102 IPR036568 -
Pumo10g00885 224 ProSitePatterns Glycosyl hydrolases family 5 signature. 170 179 IPR018087 GO:0004553|GO:0005975
Pumo10g00885 224 CDD GGCT_like 5 95 IPR013024 -
Pumo10g00885 224 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 190 IPR006840 GO:0006751|GO:0061928
Pumo10g00885 224 Pfam ChaC-like protein 4 180 IPR006840 GO:0006751|GO:0061928
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00885 Pumo-Chr10 11610401 11612933 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00885 K22596 - gmx:100793027 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00885 10 11610401 11612933 Pumo10g00885 10 11610401 11612933 ECH