Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00879 ATGGAGATCCGTGCCGATGCAGATACCAGCTCCTTTTCAAGTTTGTTCGCGGCTGTGTCATATGGATTTGCCTCAATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAATATGCATATTCAATGACTCTCCTCACTTTGCAGCAAGTGGTTACCACCTTGCTTATACACTTTGGTAGAAATATGGGATACACAAAAGCAAGAGAACTGGATATGACAACGGCCAAGCGACTGCTCCCGCTTTCAATTTTCTATAATGCCAATGTTGCTTTTGCTTTGGCGAGTTTGAAGGGAGTCAATATCCCTATGTATATTGCGATCAAGAGGCTTACGCCACTTGCTGTACTTATTGCTGGGTATTTCTCAGGAAAGGGGAGACCTACAACTCAGGTGGCTCTTTCAGTGATATTGACTGCTGCAGGAGTTCTCATTGCTGCCCTTGGAGATTTTTCCTTTGACCTTTTTGGATATAGCATGGCCTTTGTTTCCGTTTTTTTTCAGACCATGTACCTTGTGCTGGTGGAAAAATCTGGTGCTGAGGACGGACTTTCATCCGTGGAAATCATGTTCTATAACAGCTTTATATCTCTTCCATTTTTGATGTTTCTCATCATAGCCACTGGGGAATTCCCAAATTCTTTATCTTTATTATTTGCAAAGAGTTATTCTTTTTCATTTTTGGTGATCCTTATTCTTTCGTTGGTGATGGGCATCGTTCTCAACTTCACCATGTTCTTGTGTACAATTGTTAATTCAGCCTTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTTGTTTCCACGACCCTTGGTTTCTTCTTACTGGGTGGTGTTCAAGTCCATGGTTTGAATGTGACTGGATTGGTTATCAATACAGCTGGTGGTGTATGGTACTCATTTGCTAAATATCAACAGAAAAAAAGTAAGGCGGTGAAGCTAGTAACAGATGTGGAGGCTCATCGTAAATAG 972 0.4146 MEIRADADTSSFSSLFAAVSYGFASMAMVFINKAVLMQYAYSMTLLTLQQVVTTLLIHFGRNMGYTKARELDMTTAKRLLPLSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGYFSGKGRPTTQVALSVILTAAGVLIAALGDFSFDLFGYSMAFVSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFISLPFLMFLIIATGEFPNSLSLLFAKSYSFSFLVILILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKGVVSTTLGFFLLGGVQVHGLNVTGLVINTAGGVWYSFAKYQQKKSKAVKLVTDVEAHRK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00879 323 PANTHER SOLUTE CARRIER FAMILY 35 15 306 - -
Pumo10g00879 323 Pfam Triose-phosphate Transporter family 23 300 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00879 Pumo-Chr10 11534803 11538090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00879 19 322 Lipid Metabolism Gene Families AT5G19980 25.466 5.91e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00879 K15281 - gmx:100777622 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00879 10 11534803 11538090 Pumo10g00879 10 11534803 11538090 ECH