Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00877 ATGGCTCCGAGGTTGGACTTTTCTAATTGGTGGACCAAGGATACACAGAAGGGAACACCAGTGGTGGTGAAAATGGAGAACCCCACTTTCTCTGTTGTGGAGATCAATGGTGCTGATGCTGCATTCAGGCCAGTGGAGAAAAGCCGTGGCAAGAATGCCAAGCAAGTCACGTGGGTTTTGCTTCTCAGGGCTCACCGTGCTGTTGGCTGTGTCACTTGGCTTGCCACAGTGCTTTGGGCGTTGCTGGGTGCCATTAAGAAGAGGTTGATTCATGGACAAGGTGTGACTATGGAGAGTGAGAGTGACAAGTTGGTGAAAGGCAAGTTGCTGTTTAGAGTCATTAGAGTGTTCCTAGTGACTTCCTTGGCTGTTCTGGCCTTTGAGGTTGTTGCTTACCTTCAAGGTTGGCATTTTGGGAACCCCACTTTGCACATTCCTCGTACCTCTGATTTGGAAGGCTTGCTCCACCTGGCATATGTTGCTTGGTTAACCTTTCGTGCTGAGTACATTGCTCCTCCTATACAGGCACTTTCCAAGTTTTGTGTTGTTTTGTTTCTTATCCAGTCTGTGGATCGCATGCTCCTTTGCTTGGGGTGCTTTTGGATCAAATACAGGAAGGTTAAGCCAAGGATTGAAGGGGATCCGTTCAAGAGTGATGATGTTGAAGGATCTGCAAGCAATTATCCCATGGTTCTTGTTCAAATCCCAATGTGCAATGAGAGGGAGGTGTATGAGCAATCCATTTCTGCAGTCTGTGCCATTGATTGGCCAAGGGATCGTTTACTAATTCAAGTACTTGATGATTCTGATGATGAGAGCATACAGTGGTTAATTAAGGCAGAGGTCTCTAAATGGAGCCAAAAGGGAATCAATATAATCTATAGGCATCGCTTAGTCAGGACTGGATATAAAGCTGGAAATCTTAACTCTGCAATGAGCTGTGACTATGTGAAAGACTATGAGTTTGTTGCAATTTTTGATGCAGACTTTCAACCAAATCCTGATTTTCTTAAACAAACTGTGCCACATTTTAAGGACAATCCTGAACTAGGTCTGGTCCAAGCTAGGTGGTCTTTTGTGAACAAGGATGAGAATTTGTTGACTCGTCTCCAAAACATTAACTTATGCTTCCATTTTGAGGTAGAACAGCAAGTCAATGGGGTATTTCTCAATTTTTTTGGTTTCAATGGAACTGCTGGTGTTTGGAGAATCAAGGCCCTAGAAGAGTCTGGGGGCTGGCTAGAGAGGACAACTGTAGAAGATATGGACATTGCTGTCCGAGCTCATCTCAACGGTTGGAAATTTATCTTCCTAAATGATTTAAAGGTACCCTGTGAAGTTCCTGAGTCATATGAAGCTTATAGGAAGCAGCAACACCGCTGGCATTCAGGTCCTATGCAACTCTTTAGGCTGTGCCTTCCGGCGATTTTGAGATCTAAGGTGTCTCCGTGGAAGAAAGCAAACTTAATACTGCTATTTTTTCTGTTGAGGAAACTAATCCTTCCCTTTTACTCCTTCACCTTATTTTGCATAATTCTTCCCCTAACCATGTTTGTACCAGAGGCAGAGCTTCCTTTGTGGGTGATCTGCTATGTTCCTGTATTTATGTCACTCCTTAATATTCTTCCTGCTCCAAAATCTTTTCCTTTCATTGTTCCCTACCTCCTTTTCGAAAACACCATGTCCGTCACCAAATTCAATGCAATGGTATCTGGTCTCTTCCAATTGGGCAGCTCTTATGAATGGGTTGTCACAAAGAAAGCTGGCAGGTCATCAGAGTCTGATTTACTGGCTGCTGCAGAAAGGGAAGCCAAGTCAATAGAACAAAAGATTCATAGAGGAGCTTCTGACTGTGACCTTATTGAGTCACACCAATTGAAGGAACACATAGAAGCAGCTCCAGCAAAAGTTAAGAAATCTAATAAGATATATAAGAAAGAGCTGACTTTGGCATTCCTCCTTCTCACTGCTTCTGTCAGGAGTCTGTTATCTGCACAAGGAGTTCACTTCTACTTTCTACTTTTCCAAGGGGTGACCTTCCTCCTTGTGGGGCTTGATTTGATTGGAGAGCAGATGAGCTAG 2082 0.4376 MAPRLDFSNWWTKDTQKGTPVVVKMENPTFSVVEINGADAAFRPVEKSRGKNAKQVTWVLLLRAHRAVGCVTWLATVLWALLGAIKKRLIHGQGVTMESESDKLVKGKLLFRVIRVFLVTSLAVLAFEVVAYLQGWHFGNPTLHIPRTSDLEGLLHLAYVAWLTFRAEYIAPPIQALSKFCVVLFLIQSVDRMLLCLGCFWIKYRKVKPRIEGDPFKSDDVEGSASNYPMVLVQIPMCNEREVYEQSISAVCAIDWPRDRLLIQVLDDSDDESIQWLIKAEVSKWSQKGINIIYRHRLVRTGYKAGNLNSAMSCDYVKDYEFVAIFDADFQPNPDFLKQTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDLKVPCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAILRSKVSPWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRSSESDLLAAAEREAKSIEQKIHRGASDCDLIESHQLKEHIEAAPAKVKKSNKIYKKELTLAFLLLTASVRSLLSAQGVHFYFLLFQGVTFLLVGLDLIGEQMS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00877 693 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 446 IPR029044 -
Pumo10g00877 693 Pfam Glycosyl transferase family group 2 323 529 IPR001173 -
Pumo10g00877 693 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 159 690 - -
Pumo10g00877 693 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 509 IPR029044 -
Pumo10g00877 693 Coils Coil 590 617 - -
Pumo10g00877 693 FunFam probable xyloglucan glycosyltransferase 5 222 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00877 Pumo-Chr10 11517575 11521784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00877 1 693 Miscellaneous Gene Families AT4G31590 80.172 0.0 1136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00877 - - gmx:100790397 1350.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00877 10 11517575 11521784 Pumo10g00877 10 11517575 11521784 ECH