Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00797 ATGCAAGATATCCCCTTCTGTAGCCTTATAGTTTTCTTCTTTCTAATAGGGGCTTCTTTGGTTTCTCCTTTATATGATGGGCCCCTATATGACTCCACGGCCTACACTGAGTGCAAAGAGAAGCCAGAGGAGCCACTTTATGGTGGAGGACTTTTCAAGAGTGAACAACAGTCTCGTCGTGGTGTTGAAGACACCATTGCCTCATCATACGTTCTCAACAACACCTATGTGCCTTCACTCGTTCTCTATAATCTCACTCAGGGCACCATTTACTCTTTTTCTGCATGGGTGAGAGTTAAAGATTCAAGTTCAGCTATGATAAGGGCCACCTTGGAAACGGACAAAGAGACATATGACTGCATTGGGACAGTTTCGGCCAAGCGTGGATGCTGGTCATTTCTGAAGGGTGGATTTCTTCTGAATTGGCATTCAAATTTATCCATAATCTTCTTCCAGAACGCGGATGGTAAAGATATCAATATAGATGTTGCTAGCTCATCACTCCAGCCATTTACTAAGCAACAATGGAGAATCAATCAACAGTATATAATCAATACTAAAAGAAAGCGTGCCGTCACTATTCATGTGTCAGATAGTAACGGAAGGAGATTGGAAGGAGCTTCCATCTGTATAGAGCAAATCTCAAAAGACTTCCCTTTTGGATCTGCAATAGCAAAGACCATTCTTGGCAACTTACCCTATCAGAATTGGTTTGTGAAGCGGTTCAATGCGGCGGTGTTTGAAAATGAGCTCAAATGGTACGCCACAGAACCTCACGAAGGGAAGGTCAATTACACGACTTCAGACCAGATGCTGCAATTTGTTAGAACAAATAATATCATAGCCAGAGGGCACAACATATTCTGGGAAGACCCTAAATACACTCCTCCATGGGTTCTTAACCTTACAGGCATCCAGTTACAATCAGCTGTGAATTCCCGAATACACAGTCTCATGAGCCAATACAAAGATGAGTTCGTACACTGGGACGTCAGCAATGAAATGCTTCATTTTGATTTCTACGAGCAAAGGCTTGGACCTGATGCCACATTACATTTCTTTGAGACAGCACATGAATCAGATCCATTAGCAACACTGTTTATGAATGACTTTAATGTTGTGGAGACATGCAGTGATGTGAATTCCACTGTGGACGCCTATATCTCACGTGTAAGAGAACTGCAACGAAATGGCATCTTTATGGATGGAATTGGCTTGGAGGGTCACTTCACAATACCCAATCCTGCCCTTATCAGAGCCATCCTAGACAAGTTGGCAACACTTGGCCTTCCCATTTGGCTTACTGAGGTTGATATAAGCAAGACACTTGATAGAGATGCACAGGCAAATTATTTGGAGGAAGTGTTGAGGGAAGGCTTCTCACATCCTTCTGTGAATGGGATAATGCTTTGGACCGCATTTCATGCAAATGGGTGCTACCAAATGTGTCTGACAGACAATAATTTCAAGAACCTCCCAGCAGGTGATGTGGTGGACAAACTTCTTCAAGAGTGGCAAACGGGTCGTGTAGAGGGAGTCGCAGATGTGCACGGTTCCTATAGCTTTTATGGCTTCTTAGGAGAATATAGAATTAGTGTCAACTATGGCAATAGGAGTACAAAGTCAACATTCTCCCTCTCTCGAGGTGATGAAACTAGACATTTCACTATTACAATATGA 1680 0.4292 MQDIPFCSLIVFFFLIGASLVSPLYDGPLYDSTAYTECKEKPEEPLYGGGLFKSEQQSRRGVEDTIASSYVLNNTYVPSLVLYNLTQGTIYSFSAWVRVKDSSSAMIRATLETDKETYDCIGTVSAKRGCWSFLKGGFLLNWHSNLSIIFFQNADGKDINIDVASSSLQPFTKQQWRINQQYIINTKRKRAVTIHVSDSNGRRLEGASICIEQISKDFPFGSAIAKTILGNLPYQNWFVKRFNAAVFENELKWYATEPHEGKVNYTTSDQMLQFVRTNNIIARGHNIFWEDPKYTPPWVLNLTGIQLQSAVNSRIHSLMSQYKDEFVHWDVSNEMLHFDFYEQRLGPDATLHFFETAHESDPLATLFMNDFNVVETCSDVNSTVDAYISRVRELQRNGIFMDGIGLEGHFTIPNPALIRAILDKLATLGLPIWLTEVDISKTLDRDAQANYLEEVLREGFSHPSVNGIMLWTAFHANGCYQMCLTDNNFKNLPAGDVVDKLLQEWQTGRVEGVADVHGSYSFYGFLGEYRISVNYGNRSTKSTFSLSRGDETRHFTITI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00797 559 SUPERFAMILY Galactose-binding domain-like 84 162 IPR008979 -
Pumo10g00797 559 Gene3D Glycosidases 209 514 - -
Pumo10g00797 559 PRINTS Glycosyl hydrolase family 10 signature 397 409 IPR001000 GO:0004553|GO:0005975
Pumo10g00797 559 PRINTS Glycosyl hydrolase family 10 signature 364 375 IPR001000 GO:0004553|GO:0005975
Pumo10g00797 559 PRINTS Glycosyl hydrolase family 10 signature 282 294 IPR001000 GO:0004553|GO:0005975
Pumo10g00797 559 PRINTS Glycosyl hydrolase family 10 signature 326 337 IPR001000 GO:0004553|GO:0005975
Pumo10g00797 559 Pfam Glycosyl hydrolase family 10 214 473 IPR001000 GO:0004553|GO:0005975
Pumo10g00797 559 SMART glyco_10 251 502 IPR001000 GO:0004553|GO:0005975
Pumo10g00797 559 Gene3D - 66 167 - -
Pumo10g00797 559 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 205 501 IPR001000 GO:0004553|GO:0005975
Pumo10g00797 559 PANTHER GLYCOSYL HYDROLASE 76 550 IPR044846 GO:0004553|GO:0005975
Pumo10g00797 559 SUPERFAMILY (Trans)glycosidases 204 509 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00797 Pumo-Chr10 9931601 9935040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00797 26 559 Glycoside Hydrolase AT4G38650 65.613 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00797 - - gmx:100806005 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00797 10 9931601 9935040 Pumo10g00797 10 9931601 9935040 ECH