Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00747 ATGGCACTTCCCTATTTCAGCGTCTATTCGGTTCTTCTTCTTCTTTTCGTAAATTCAGGAAGCGCCCACAATTACGAGGATGCATTGTCCAAGGCAATCCTATTCTTCGAGGGGCAACGTTCGGGTTTCTTGCCGCAGGACCAGAGACAGAACTGGCGGGCCAATTCGGGTCTCAGTGACGGGTGGACTTACAACGTGGACCTCACCGGCGGCTACTATGACGCCGGCGACAACATCAAATTCGGGTTTCCGATGGCATTCACGACCACAATGCTGTCGTGGAGTGTGATTGAGTTCGGAGACATGATGCCTCCCAATGAGCACCGAAACGCGCTGGTCGCAATCCGTTGGGCTACCGATTATTTGCTCAAAACTGTTTCTCAGCCCAACCGCATTTTCGTTCAGGTGGGTGATCCAATCTCTGACCACAACTGTTGGGAAAGGCCTGAGGACATGGACACAAGCAGGACTGTGTATGCAGTTGATGCACCAAACCCAGCTTCAGATGTAGCTGGTGAAACTGCTGCGGCACTAGCTGCTGCATCAATGGCTTTTCGTTCATCGGATCCTGGTTATTCAGAGACTTTGCTACGAAATGCTGCTAAAGCCTTTCAATTTGCAGATACCTATAGGGGTGCCTACAGTGACAATGCTGATGTTAGGAGTGGTGTATGCCCATATTATTGTGACTTCGATGGTTATCAGGACGAATTGTTATGGGGAGCCGCATGGCTAAGGAGGGCCACTCGGGACGAAAATTTCCTCAACTACATTCAAAGCAATGGCAAAACGCTCGGTGCTGAAGACAATATAAATGAGTTCGGTTGGGACAACAAGCATGCTGGTCTTAACGTTCTTGTCTCCAAGGAAGTTGTAGAAGGAAACGTGATGTCTCTTGAATCCTACAAGACTTCGGCAGAGAGCTTTTTGTGCACACTGATACCCGAAACATCAAGTTCACATATAGAGTACACTCCCGGTGGACTGATATACAGGCCTGGGGGCAGCAACTTGCAACATGCAACTTCAATTGCATTCCTTGAATTGGTTTACGCTAATTACCTATCTCGCACTTCACAAACCATCAATTGTGGGAACGTGTATGTTAACGCAGAAACACTTCGGCAGCATGCTAAGAAGCAGGTAGATTACATTTTGGGCGACAACCCAATGGGTATGTCGTACATGGTTGGGTACAGCAACAAGTATCCACAGCGTATTCACCATCGTGGCTCCTCTTTACCCTCTATTAAGGACCATCCTCAGTTCATTGCCTGCAAAGAAGGCTCAATTTACTTCAACTCAACTAATCCTAATCCTAATGTTCTTGTGGGAGCTATTGTGGGAGGACCCGGAGAAGATGATGTGTATGGGGATGATAGGGCTGATTTTAGGAAGTCCGAACCAACCACATACATTAATGCACCATTTGTTGGGATCTTAGCATACTTTGTTGCTAATCCCAACCCTTGA 1473 0.4745 MALPYFSVYSVLLLLFVNSGSAHNYEDALSKAILFFEGQRSGFLPQDQRQNWRANSGLSDGWTYNVDLTGGYYDAGDNIKFGFPMAFTTTMLSWSVIEFGDMMPPNEHRNALVAIRWATDYLLKTVSQPNRIFVQVGDPISDHNCWERPEDMDTSRTVYAVDAPNPASDVAGETAAALAAASMAFRSSDPGYSETLLRNAAKAFQFADTYRGAYSDNADVRSGVCPYYCDFDGYQDELLWGAAWLRRATRDENFLNYIQSNGKTLGAEDNINEFGWDNKHAGLNVLVSKEVVEGNVMSLESYKTSAESFLCTLIPETSSSHIEYTPGGLIYRPGGSNLQHATSIAFLELVYANYLSRTSQTINCGNVYVNAETLRQHAKKQVDYILGDNPMGMSYMVGYSNKYPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPNVLVGAIVGGPGEDDVYGDDRADFRKSEPTTYINAPFVGILAYFVANPNP 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00747 490 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 384 410 IPR018221 -
Pumo10g00747 490 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 457 475 IPR033126 -
Pumo10g00747 490 PANTHER ENDO-1,4-BETA-GLUCANASE 17 485 - -
Pumo10g00747 490 Gene3D - 21 488 IPR012341 GO:0005975
Pumo10g00747 490 Pfam Glycosyl hydrolase family 9 25 481 IPR001701 GO:0004553|GO:0005975
Pumo10g00747 490 FunFam Endoglucanase 21 489 - -
Pumo10g00747 490 SUPERFAMILY Six-hairpin glycosidases 22 487 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00747 Pumo-Chr10 9535559 9539304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00747 6 487 Glycoside Hydrolase AT1G70710 60.744 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00747 K01179 - gmx:100799911 966.837