Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00740 ATGGAAGCTATCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGCCAACAACAGGCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGTTCGGATAATATGGTTACTGATGAGGTAGAGCTTCAGCAACATCAGAAACTTGAGAAGCTTTACATATCAACACGTGCTGGAAAGCATTATCAAAGGGATATTGTCCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGGAACAAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTACCAGTGGTAGTACATTATCAAGAGCTGCACTAAATTATGCACGTGCCCGTGCGCAAATGGAGAAGGAGCGTGGGAGCTTACTAAAAGCTCTTGGCACACAGGTTGCAGAGCCCTTAAGAGCAATGGTGATGGGAGCTCCATTGGAGGATGCCCGGCATCTTGCTCAACGTTATGACAGAATGCGGCAGGAAGCCGAAGCCCAGGCTATTGAAGTTTCCAAACGCCAGGCAAAAGTAAGAGAAACACCAGGCAATGCTGAGAATGCTATGAAGCTGGAAGCAGCTGAAACAAAGCTGCAAGACCTGAAGACAAACATGGCCATATTGGGAAAAGAAGCAGCTGCCGCCATGGCTGCTGTTGAAGCACAGCAACAGAGGTTAACCCTCCAGCGTCTTATAGCTATGGTTGAAGCAGAGCGTGCCTATCATCAAAGAGTACTCCAAATACTTGATCAGCTTGAGGGAGAGATGATATCAGAACGACAACGAATTGAAGCCCCTCCTACACCAAGTGTGGATAGCAGCATGACACCACCACCCCCATCATATGAAGAAGTAAATGGTGTATATGCTTCTCAAGCACATAATGGCTCAACAGATAGTATGGGTTACTTCTTAGGAGAGGTTTTATTTCCCTACCATGCTGAGTCTGAAGTTGAATTGAATCTATCAGTTGGGGATTATATTGTTGTTCGAAAGGTAACAAACAATGGATGGGCTGAGGGTGAATGCAAAGGGAAAGCAGGTTGGTTTCCATTTGGTTACATTGAAAGAAGGGAGCGAGTCCTTGCAAGCAAGGTGGCTGAAGTGTTTTGA 1119 0.4558 MEAIRKQASKLREQVARQQQAVLKQFGAGGYGGSDNMVTDEVELQQHQKLEKLYISTRAGKHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGADNTCTSGSTLSRAALNYARARAQMEKERGSLLKALGTQVAEPLRAMVMGAPLEDARHLAQRYDRMRQEAEAQAIEVSKRQAKVRETPGNAENAMKLEAAETKLQDLKTNMAILGKEAAAAMAAVEAQQQRLTLQRLIAMVEAERAYHQRVLQILDQLEGEMISERQRIEAPPTPSVDSSMTPPPPSYEEVNGVYASQAHNGSTDSMGYFLGEVLFPYHAESEVELNLSVGDYIVVRKVTNNGWAEGECKGKAGWFPFGYIERRERVLASKVAEVF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00740 372 ProSiteProfiles Src homology 3 (SH3) domain profile. 303 362 IPR001452 GO:0005515
Pumo10g00740 372 PANTHER SH3 DOMAIN-CONTAINING 16 360 - -
Pumo10g00740 372 Pfam Variant SH3 domain 310 358 IPR001452 GO:0005515
Pumo10g00740 372 Coils Coil 1 21 - -
Pumo10g00740 372 Coils Coil 220 240 - -
Pumo10g00740 372 Coils Coil 186 213 - -
Pumo10g00740 372 Gene3D Arfaptin homology (AH) domain/BAR domain 45 267 IPR027267 -
Pumo10g00740 372 SUPERFAMILY BAR/IMD domain-like 47 258 IPR027267 -
Pumo10g00740 372 SMART SH3_2 306 361 IPR001452 GO:0005515
Pumo10g00740 372 Gene3D SH3 Domains 293 370 - -
Pumo10g00740 372 Coils Coil 149 176 - -
Pumo10g00740 372 SUPERFAMILY SH3-domain 269 360 IPR036028 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00740 Pumo-Chr10 9456047 9462186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00740 - - gmx:100783004 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00740 10 9456047 9462186 Pumo10g00740 10 9456047 9462186 ECH