Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00739 ATGGCTTCTTCCTCGCGCGCAAGGAGTAGCTCACCGTTTTCTTACCGAAAACCTTCGACTCCTTACTCGTCCACTTCTTCGTCTTCTTCATTCACTAACGGAAGGTTAATGCCTCGCTCCAGCTCTTCCTCTACGTCGTCGTTTTTCAACTCCGGAGGCCGATCCATGACTCCGAGCCGCGGTCGAAGCGAGTCGACGTATCACGGCTCGCGCGGTTACAGCGGCCGTTCGCCGGTGGCGTTCGGAGCGGAGGAGCTGGTTGCGGAGCCGGTGGATTCGTCGAGGTCAGGCGATAGCATTTCGGTCACGATTCGGTTTAGGCCGTTGAGTGAAAGGGAGTATCAGAGAGGGGACGAGATCGCGTGGTATGCGGATGGCGACAAAATTGTCAGAAATGAGTATAATCCAGCTACTGCCTATGCATTTGATAGAGTTTTTGGACCACATACCAATTCAGACGAAGTGTATGAAGTGGCAGCCAAACCTGTGGTGAAGGCTGCCATGGAGGGCGTCAATGGAACTGTGTTTGCCTATGGTGTGACGAGTAGTGGTAAGACACATACTATGCATGGAGACCAAAATTCTCCTGGTATCATACCACTGGCTATAAAGGATGTTTTCAGTATGATCCAAGATACCCCAGGAAGAGAATTCTTACTCCGAGTGTCATATCTAGAAATATACAATGAGGTGATAAATGATTTACTTGATCCAACTGGCCAAAACTTGCGAGTCAGAGAAGATGCACAGGGAACTTATGTGGAGGGTATAAAGGAAGAAGTTGTTTTATCTCCTGGACATGCACTTTCTTTTATTGCTGCTGGAGAAGAGCATCGTCATGTTGGATCAAACAATTTTAATCTCTTCAGCAGCCGGAGTCACACAATATTTACATTGATGATAGAAAGCAGTGCTCATGGTGATGAGTATGATGGAGTTATCTTCTCTCAGCTAAACTTGATTGATTTGGCTGGATCTGAGAGCTCAAAAACTGAAACTACTGGATTAAGAAGAAAGGAAGGATCTTACATCAACAAAAGTCTTCTTACACTTGGAACTGTTATAGGAAAATTGAGCGAGGGGAAGGCGTCTCATGTTCCATATAGAGATTCAAAGCTAACCCGCCTCCTGCAATCTTCTCTTAGTGGGCATGGCCATGTTTCACTTATATGCACAGTAACTCCGGCATCTAGTAATATGGAGGAAACTCATAATACCTTGAAGTTTGCCAGCAGGGCAAAACGAGTAGAAATATATGCGTCCCGTAATAAGATTATTGATGAGAAATCTCTAATTAAGAAATACCAGAGAGAAATTTCAGTCCTCAAACTAGAACTTGATCAACTAAAGAAGGGAATGCTAGTTGGTGTCAATCATGAAGAAATTTTGACCTTAAAGCAAAAGTTGGAAGAAGGTCAAGTGAAAATGCAATCAAGATTGGAAGAAGAGGAGGAAGCCAAGTCTGCTCTTATGAGTAGGATCCAGAGACTAACCAAACTCATTCTGGTTTCCTCAAAGAATGCAATTCCTGGATATCTAACTGACGTTCCCAACCATCAGCGAAGTCACTCTGTTGGCGAGGATGATAAATTTGATGCCTTGCGTGATGGTATGTTGATTGAAAATGAGAGTCAGAAAGATCCTTCTGCAGTGTCATCAGATCAGTTTCATGACGGTAGACATAAAAGATCATCTAGTAGATGGAATGAAGAGTTCTCCCCAGCTAGCAGTACCGTTACTGAATCAACACAAGCTGGTGAACTGATCAGTAGAACAAAACTGACAGCAGGTGGGATTACAACGTCTGATCAGAAGGATCTTCTTGTTGAACAAGTCAAAATGCTAGCTGGAGATATTGCTTTCAGTACCAGCACTCTGAAGCGCTTGATGGAGCAATATGTAAATGACCCTGAAGGCTCCAAAACTCAGTTACAGATTGAGAACTTGGAACGTGAGATCCAGGAAAAAAGGAAGCAAATGAGGGTGTTAGAGCAAAGATTAATTGAGACTGGAGAATCTCCAGTGGCTAATTCATCACTAGTTGAAATGCAGCAGACAGTCACTAGGTTAATGACTCAATGTAATGAAAAGGCCTTTGAGTTGGAGCTAAAATCTGCAGACAACCGTGTCCTTCAGGAGCAGCTAAATGATAAGTGTTCTGAAAACAGAGATTTGCAAGAAAAGGTGAAGCAGCTAGAGCAGCAACTGGCAGCAGTTACTAGTGGTACATCGTTAGTGTCTTCTGAACAGTGTGCATCTGGAGAACACATTGATGAGTTGAAAAAGAAAATACAATTCCAGGAAATTGAAAATGAAAAACTGAAGCTAGAGCAAGTTCACTTGTCAGAAGAGAATAGTGGGTTGCGTGTGCAGAATCAGAAACTCTCTGAAGAAGCTTCGTATGCCAAAGAACTGGCCTCTGCTGCTGCTGTGGAGCTGAAAAATTTGGCTGGAGAAGTGACCAAACTTTCATTGCAGAATGCGAAGTTGGAAAAAGAATTGATGGCTACACGAGACCTGGTCAACTCTCGTAGTGTGCAAACGGTTAATGGTGTCAACCGCAAGTACAGTGATGCAAGAACTGGAAGGAAGGGGAGGATTTCTAGCCGTGCTAATGAAATTTCAGGAGCTGGTGTAGATGATTTTGAGTCATGGAGTCTTGATGCAGATGATTTGAAGATGGAACTACAGGCTAGGAAACAACGAGAGGCAGCTCTGGAGGCTGCATTAGCCGAGAAGGAATTTGTGGAAGAACAGTACAGGAAAAAAGCTGAAGAGGCCAAGAAAAGAGAAGAAGCCTTGGAGAACGATTTAGCAAATATGTGGGTCCTTGTTGCTAAGTTAAAAAAAGAAGGGGGTGCTGTCCCAGAATCAAACACCGATAAAAAAAATGATGGTGCAGAACACATAAATGATCCGAAAATTAATGACGTTGAAAGTAATATTGTTCCCAAGGAGCAGCTTTTGGATGCACCAAAACCAGATGATGAAATTCCCAAAGAAGAGCCCTTGGTTGTTCGCCTCAAGGCGCGCATGCAAGAAATGAAGGAAAAAGAACTCAAGTACCTTGGGAATGGTGATGCCAATTCCCATGTTTGTAAAGTATGTTTTGAATCTGCAACTGCAGCAATTCTTCTTCCATGCCGACATTTTTGTTTGTGTAAATCTTGTTCACTTGCTTGTTCTGAATGTCCAATATGCCGCACAAATATTACAGATAGGATTTTTGCTTTTACATAA 3240 0.4318 MASSSRARSSSPFSYRKPSTPYSSTSSSSSFTNGRLMPRSSSSSTSSFFNSGGRSMTPSRGRSESTYHGSRGYSGRSPVAFGAEELVAEPVDSSRSGDSISVTIRFRPLSEREYQRGDEIAWYADGDKIVRNEYNPATAYAFDRVFGPHTNSDEVYEVAAKPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQNSPGIIPLAIKDVFSMIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSAHGDEYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKASHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNMEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKLELDQLKKGMLVGVNHEEILTLKQKLEEGQVKMQSRLEEEEEAKSALMSRIQRLTKLILVSSKNAIPGYLTDVPNHQRSHSVGEDDKFDALRDGMLIENESQKDPSAVSSDQFHDGRHKRSSSRWNEEFSPASSTVTESTQAGELISRTKLTAGGITTSDQKDLLVEQVKMLAGDIAFSTSTLKRLMEQYVNDPEGSKTQLQIENLEREIQEKRKQMRVLEQRLIETGESPVANSSLVEMQQTVTRLMTQCNEKAFELELKSADNRVLQEQLNDKCSENRDLQEKVKQLEQQLAAVTSGTSLVSSEQCASGEHIDELKKKIQFQEIENEKLKLEQVHLSEENSGLRVQNQKLSEEASYAKELASAAAVELKNLAGEVTKLSLQNAKLEKELMATRDLVNSRSVQTVNGVNRKYSDARTGRKGRISSRANEISGAGVDDFESWSLDADDLKMELQARKQREAALEAALAEKEFVEEQYRKKAEEAKKREEALENDLANMWVLVAKLKKEGGAVPESNTDKKNDGAEHINDPKINDVESNIVPKEQLLDAPKPDDEIPKEEPLVVRLKARMQEMKEKELKYLGNGDANSHVCKVCFESATAAILLPCRHFCLCKSCSLACSECPICRTNITDRIFAFT 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00739 1079 MobiDBLite consensus disorder prediction 1 74 - -
Pumo10g00739 1079 SMART kinesin_4 97 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00739 1079 FunFam Kinesin-like protein KIN-7D, mitochondrial 1007 1078 - -
Pumo10g00739 1079 Coils Coil 466 500 - -
Pumo10g00739 1079 Gene3D Kinesin motor domain 90 446 IPR036961 -
Pumo10g00739 1079 Coils Coil 708 742 - -
Pumo10g00739 1079 MobiDBLite consensus disorder prediction 542 584 - -
Pumo10g00739 1079 Pfam Zinc finger, C3HC4 type (RING finger) 1031 1073 - -
Pumo10g00739 1079 SUPERFAMILY RING/U-box 1032 1073 - -
Pumo10g00739 1079 ProSitePatterns Kinesin motor domain signature. 316 327 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo10g00739 1079 Coils Coil 432 452 - -
Pumo10g00739 1079 Coils Coil 757 784 - -
Pumo10g00739 1079 ProSiteProfiles Zinc finger RING-type profile. 1033 1068 IPR001841 -
Pumo10g00739 1079 Coils Coil 813 840 - -
Pumo10g00739 1079 MobiDBLite consensus disorder prediction 1 72 - -
Pumo10g00739 1079 MobiDBLite consensus disorder prediction 953 976 - -
Pumo10g00739 1079 CDD mRING-HC-C3HC5_CGRF1-like 1033 1068 - -
Pumo10g00739 1079 MobiDBLite consensus disorder prediction 954 975 - -
Pumo10g00739 1079 Coils Coil 889 941 - -
Pumo10g00739 1079 PRINTS Kinesin heavy chain signature 170 191 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00739 1079 PRINTS Kinesin heavy chain signature 284 301 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00739 1079 PRINTS Kinesin heavy chain signature 366 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00739 1079 PRINTS Kinesin heavy chain signature 317 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00739 1079 Coils Coil 639 666 - -
Pumo10g00739 1079 PANTHER CENTROMERE PROTEIN E 98 959 IPR027640 GO:0003777|GO:0007018
Pumo10g00739 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 451 IPR027417 -
Pumo10g00739 1079 ProSiteProfiles Kinesin motor domain profile. 99 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00739 1079 Pfam Kinesin motor domain 105 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo10g00739 1079 CDD KISc_CENP_E 99 416 - -
Pumo10g00739 1079 MobiDBLite consensus disorder prediction 569 584 - -
Pumo10g00739 1079 MobiDBLite consensus disorder prediction 553 568 - -
Pumo10g00739 1079 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1007 1078 IPR013083 -
Pumo10g00739 1079 FunFam Kinesin-like protein KIN-7G 91 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00739 Pumo-Chr10 9433057 9445747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00739 35 1078 Miscellaneous Gene Families AT4G39050 72.633 0.0 1504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00739 K11498 - gmx:100812720 1858.96