Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00723 ATGGCCAGTGATTCGTCTGTAATCTCCAATGGAGACAGCAATGGCAGTGTCAGTCCACTACCTAACCTGCAAAGGACTTACCAAGTGGTAGTGGCTGCCACTCAAGATTGGGGCATAGGTAAGGATGGGAAATTACCCTGGAGACTGCCTACTGATCTCAAATTTTTTAAGGAGATTACTATGAAAACATCCGATCCTGGGAAGAAGAATGCCATTGTAATGGGAAGGAAAACATGGGAGAGTATCCCTCTTGAGTACAGGCCTCTTTCTGGTCGCCTTAATGTTGTTCTTACTCGCTCAGGCAGTTTTGATATTGCAACGGCAGAGAATGTTGTTATATGTGGAAGTATGTCTTCTGCATTGGAGCTATTAGCTGCTTCTCCTTACTCTCTGTCAATTGAGAAAGTATTTGTTATAGGAGGTGGTCAGATATTTAGAGAGGCTCTCAATGCGCCTGGATGTGAAGCTATCCACTTAACAGAAATTCAGTCAAGCATTGAGTGTGACACTTTTATGCCTCCAGTTGATTTCACTATATTTTGGCCATGGTACTCATCCTTTCCTAAAGTGGAAAACAACATCCGCTATTCTTTCACCACTTATGTGCATGTAAGGAGTTCTGCTGCGGAGTCCCCAAGTCAGAATATTGATCCACTTTTTGATAATAATTCTGATTCCATAAAATTTGAGGTCAAGGATTTTTCTTTTCTTCCTAAAATGATTTTTGAGAGACATGAGGAGTATATGTATCTTAAGTTGGTTCAAGACATCATTTCTGAAGGTACAACCAAGGATGATAGGACAGGGACTGGTACCTTGTCAAAATTTGGTAGCCAGATGAGGTTCAATCTGCGCAGAAGCTTCCCTCTTCTAACAACTAAGAAAGTATTTTGGAGTGGGGTTGTTGAAGAGCTTCTTTGGTTTATTAGTGGCTCAACAAATGCCAAGACTTTGAAGATAAATCCAAAGAAGAAAGATATAGATTCTTTTGTGGCTGCTGATTTCAAGCTCATAGGCTATGATCCTCACCAGAAGATTGATATGAAGCTGGCTGTCTAA 1059 0.4089 MASDSSVISNGDSNGSVSPLPNLQRTYQVVVAATQDWGIGKDGKLPWRLPTDLKFFKEITMKTSDPGKKNAIVMGRKTWESIPLEYRPLSGRLNVVLTRSGSFDIATAENVVICGSMSSALELLAASPYSLSIEKVFVIGGGQIFREALNAPGCEAIHLTEIQSSIECDTFMPPVDFTIFWPWYSSFPKVENNIRYSFTTYVHVRSSAAESPSQNIDPLFDNNSDSIKFEVKDFSFLPKMIFERHEEYMYLKLVQDIISEGTTKDDRTGTGTLSKFGSQMRFNLRRSFPLLTTKKVFWSGVVEELLWFISGSTNAKTLKINPKKKDIDSFVAADFKLIGYDPHQKIDMKLAV 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00723 352 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 320 352 IPR036926 -
Pumo10g00723 352 Gene3D Dihydrofolate Reductase, subunit A 14 205 IPR024072 -
Pumo10g00723 352 PRINTS Dihydrofolate reductase signature 52 60 - -
Pumo10g00723 352 PRINTS Dihydrofolate reductase signature 38 48 - -
Pumo10g00723 352 PRINTS Dihydrofolate reductase signature 72 83 - -
Pumo10g00723 352 PRINTS Dihydrofolate reductase signature 135 149 - -
Pumo10g00723 352 MobiDBLite consensus disorder prediction 1 20 - -
Pumo10g00723 352 PANTHER THYMIDYLATE SYNTHASE 1 317 352 IPR045097 GO:0016741
Pumo10g00723 352 CDD DHFR 30 202 IPR001796 GO:0004146|GO:0046654
Pumo10g00723 352 Pfam Dihydrofolate reductase 28 202 IPR001796 GO:0004146|GO:0046654
Pumo10g00723 352 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 317 352 IPR036926 -
Pumo10g00723 352 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 226 318 IPR036926 -
Pumo10g00723 352 FunFam Bifunctional dihydrofolate reductase-thymidylate synthase 8 204 - -
Pumo10g00723 352 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 243 319 IPR036926 -
Pumo10g00723 352 SUPERFAMILY Dihydrofolate reductase-like 21 202 IPR024072 -
Pumo10g00723 352 ProSitePatterns Dihydrofolate reductase (DHFR) domain signature. 38 60 IPR017925 GO:0004146
Pumo10g00723 352 ProSiteProfiles Dihydrofolate reductase (DHFR) domain profile. 26 203 IPR001796 GO:0004146|GO:0046654
Pumo10g00723 352 Pfam Thymidylate synthase 249 319 IPR023451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00723 Pumo-Chr10 9234927 9238000 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00723 K13998 - gmx:547833 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00723 10 9234927 9238000 Pumo10g00723 10 9234927 9238000 ECH