Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00700 ATGATACATACCACTCTTTTATGTTATTTTGTCGGTTTTGCTTTTCCCTTTATAAGAAGGCATCATCTATTAATTCTTCACTTCAAGATTAGTTGTTGGAGTAAGCAAGAAATGGCTTCAAATTCTTCAATTCTCCTCTCCCTTTCTCTATTGGCCATCGCCCTCTCCCTCTCCCTGGCTGAGTCGCAATCTTTTATCGGAGTAAACTACGGCCAGGTCGCCGACAACCTTCCGGCGCCGGAGGACACGGCCAACCTCCTCAAATCCACCACCATCGGAAAAGTCCGTCTCTACGGCGCCGATCCCGCCATCATCAAGGCCCTGGCCAATTCCGGCATCGGAATCGTCATCGGCACCGGCAACGGCGACATTCCGAGTCTTGCCGCCGATCCCAACGCGGCCACTCAGTGGGTGAACGCCAACGTCTTACCCTACTACCCGGCCAGCAAAATCACTCTCATCACCGTCGGAAACGAGATTTTAACCTTAGCCGACCAGGGTCTAATGTCTCAGCTCGTCCCGGCGATGCGAAATGTCCAAAATGCCCTGAACGCGGCCTCGCTGGGCGGCAAGATCAAGGTCTCGACGGTGCACTCGATGGCCGTGTTGACTCAGTCGGACCCGCCGTCGTCCGGGTTGTTCAACCCGGCGCTCCAAGACACGCTCAAACAGTTGCTGGCTCTTCTGAAGGATAACAAATCGCCGTTCACGATCAACCCGTACCCGTTCTTCGCTTACCAGAGCGACCCGAGACCCGAAACGCTCGCGTTTTGCCTCTTCCAGCCCAACTCGGGCCGGGTCGACTCCGGCAACGGGAAGCTTTACACCAACATGTTCGATGCTCAGGTTGATGCTGTACATTCTGCTTTGAGTGCTATGGGTTTCCAGGACGTGGAGATTGTGGTTGCTGAGACCGGATGGCCCTCACGTGGTGACAGTAACGAAGTGGGACCCAGTCTTGAAAATGCAAAGGCCTATAACGGGAACCTGATTGCTCATCTTAGATCATTGGTTGGGACACCTTTGATGCCTGGAAAATCTGTGGAGACTTACATTTTTGCACTTTATGATGAGGATCTAAAACCAGGCCCAGGATCTGAACGTGCATTTGGGCTGTTCAAAACTGATCGTACCGTGTCATACGACGTTGGCTTAGCCAAGTCTAGCCAGCAGACTCCAACAACTCCAGTTACTCCAGCACCTAACACTGCTGGATGGTGTGTACCCAAAGCTGGAGTTTCAGATGCTCAGTTGCAGGCCAACATTGACTACGCCTGTAGCCAAGGCATAGATTGTGGGCCAATTCAACCAGGAGGCGCTTGTTTTGAGCCTAACACGGTAGCATCCCATGCTGCATTTGCCATGAATCTCTACTACCAAACTTCTAGCAAAAATCAATGGAACTGTGACTTCTCTCAATCAGCAACACTCACATCCCAAAATCCAAGTAAGCGCTTTCTAGAAACTTTCCCCCCTTTAGATCACACTCTTTACTATTGA 1500 0.5133 MIHTTLLCYFVGFAFPFIRRHHLLILHFKISCWSKQEMASNSSILLSLSLLAIALSLSLAESQSFIGVNYGQVADNLPAPEDTANLLKSTTIGKVRLYGADPAIIKALANSGIGIVIGTGNGDIPSLAADPNAATQWVNANVLPYYPASKITLITVGNEILTLADQGLMSQLVPAMRNVQNALNAASLGGKIKVSTVHSMAVLTQSDPPSSGLFNPALQDTLKQLLALLKDNKSPFTINPYPFFAYQSDPRPETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSAMGFQDVEIVVAETGWPSRGDSNEVGPSLENAKAYNGNLIAHLRSLVGTPLMPGKSVETYIFALYDEDLKPGPGSERAFGLFKTDRTVSYDVGLAKSSQQTPTTPVTPAPNTAGWCVPKAGVSDAQLQANIDYACSQGIDCGPIQPGGACFEPNTVASHAAFAMNLYYQTSSKNQWNCDFSQSATLTSQNPSKRFLETFPPLDHTLYY 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00700 499 ProSitePatterns Glycosyl hydrolases family 17 signature. 298 311 IPR000490 GO:0004553|GO:0005975
Pumo10g00700 499 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 54 478 IPR044965 GO:0004553|GO:0005975
Pumo10g00700 499 SMART X8_cls 405 486 IPR012946 -
Pumo10g00700 499 Gene3D Glycosidases 65 392 - -
Pumo10g00700 499 FunFam glucan endo-1,3-beta-glucosidase 7 401 489 - -
Pumo10g00700 499 Pfam X8 domain 406 476 IPR012946 -
Pumo10g00700 499 SUPERFAMILY (Trans)glycosidases 66 383 IPR017853 -
Pumo10g00700 499 Pfam Glycosyl hydrolases family 17 66 383 IPR000490 GO:0004553|GO:0005975
Pumo10g00700 499 Gene3D - 402 489 - -
Pumo10g00700 499 FunFam Glucan endo-1,3-beta-glucosidase 14 64 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00700 Pumo-Chr10 8978090 8982649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00700 60 483 Miscellaneous Gene Families AT2G16230 66.588 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00700 - - gmx:100778892 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00700 10 8978090 8982649 Pumo10g00700 10 8978090 8982649 ECH