Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00346 ATGCTTGGATGCTGCCTCCTCTCACCATTTGGATTTGTGGCATTTTCAGTCACACTCCGTTATGGGTATTACGGCGATTCTCGCATCCTGCTTGGCCCTGCCTCGTCTCGTTTGATGAAGATCAGTTCTGTTTTTGTAAAGCAGCTTCAAGTGTCAAACAAGGGCAATAATCAAGTTATTCTTCACGCCTTCAATGAGAAGCCCGAGTTAAGCTACCAAACTAATTGGACGGTGTCGAATTTCTTCCTTGTTGAAGCGTATAAAAGCAAGGGAATTTCTTTGTGGTTAAATCAGGGCTCCACCGTTCGTATGAGGTGGGAAGCAAATACTACTAGTAGTTTGAATCAGCTACATGGAATGGTGATCAAAGGAGAAAAGAAGTTTGAACTACTAAAGGCTAAACAAACGAGCTTCCCTAATGCAATTGCTCTTCACGAGTCTGTTAAAGGTAAAGAAGCTGAATACAAGATTGAGGAAGATAATATATACCACATTGGGATTCTAAACATGAATGGCAGGAACATAATCTTGAGTATGAAATTTAATGTTTCGGCAAAGGTATATGATACCACCAAAGCCAAGAAGATGTGCTCTACTGCAAATGGATCTTGTAGGCTCAGTTTTGTCTTCCCTAATACTCATTATGTTATTCTTACGGCAACTAGCAATGGAGATGGGGGATCGTATGTTGAAATTTCTTTTCTGGCTCGTGTGTTGACCTACATATTACTTTTAGGAGCTCTTATGATTGTTGTTTATCTGATTCTGAAGTTCCTTGGAGTCTATGATGGTGGTGATCAGAATAGTCTTGTGACAGTTGGCGTCACATACAGAACAAGGAATGTAGTTACAACGCAAACCGAAACTGAGCCCTTGATGCGAGTGGAGACAAATCGATTGACATATGGAACAAATGCAAAAGATGATGATGAAGAAGATTCAGGAGCATCCAGTAGCTCTTCAGAGGAGTTATATGATGAAAAATTATGTTGCATTTGTTATGATGGACAACGCAACAGCTTCTTTGTTCCTTGTGGACATTGTGTCACTTGCTATGACTGTGCACAGAGGATTGTCGATGAGGAGAGCAAAGTGTGTCCTATATGCCGAAGGCTTATTCACAAAGTACGAAGATTATTTCATAATTAG 1149 0.4038 MLGCCLLSPFGFVAFSVTLRYGYYGDSRILLGPASSRLMKISSVFVKQLQVSNKGNNQVILHAFNEKPELSYQTNWTVSNFFLVEAYKSKGISLWLNQGSTVRMRWEANTTSSLNQLHGMVIKGEKKFELLKAKQTSFPNAIALHESVKGKEAEYKIEEDNIYHIGILNMNGRNIILSMKFNVSAKVYDTTKAKKMCSTANGSCRLSFVFPNTHYVILTATSNGDGGSYVEISFLARVLTYILLLGALMIVVYLILKFLGVYDGGDQNSLVTVGVTYRTRNVVTTQTETEPLMRVETNRLTYGTNAKDDDEEDSGASSSSSEELYDEKLCCICYDGQRNSFFVPCGHCVTCYDCAQRIVDEESKVCPICRRLIHKVRRLFHN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00346 382 PANTHER OS05G0521000 PROTEIN 10 380 - -
Pumo10g00346 382 SMART ring_2 330 369 IPR001841 -
Pumo10g00346 382 Pfam Domain of unknown function (DUF4793) 153 254 IPR032010 -
Pumo10g00346 382 ProSiteProfiles Zinc finger RING-type profile. 330 370 IPR001841 -
Pumo10g00346 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 305 381 IPR013083 -
Pumo10g00346 382 Pfam Domain of unknown function (DUF4792) 60 128 IPR032008 -
Pumo10g00346 382 Pfam Zinc finger, C3HC4 type (RING finger) 327 376 - -
Pumo10g00346 382 SUPERFAMILY RING/U-box 321 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00346 Pumo-Chr10 4591947 4594775 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00346 - - gmx:100777075 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00346 10 4591947 4594775 Pumo10g00346 10 4591947 4594775 ECH