Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00342 ATGAAGTCCCAAATGAAGAAAAAACAAGTGACCCCCATTCCTAAGACTCCTTGCGACACCAGCGATCACATGACGGAAGGTTCCAGGGATCAGCATTGCATCAACCCTTGTTGTTTCTTCTGCAGCATGAGAGAACCTGATTCATCTCTCAGAAGGGCTGGAATAGCGACCTGCTTCAAAGAAATGCCTCAGGGAGAGAATCATGAACACGTGTTGGTGCTCAGTGGACTATGGCACATCGCAATGACCCAACCCAACGACCCAGAGTTCCCATCCCTCGGCATATTCAAGTGCATGGCAAGTCTAATCCACAGAGGCATAAACGACAGACACTGGCTTCTCACAAATCAAAACATCTACATACCCTATTATGCTGCTCACATCATTGGCTCTTACACCATGAACAAGGAGGAGTTTGCACAACTAGCCGTGAAATCAGGTGTGATACCCCCATTGCTGGACCTGCTTAGGGGGAAAATCAGTTGGGTTGAGCAAAGAGTTGCTGTTAGAGCACTTGGTCACTTGGCCAGTTACAAAAGCACGTTTGAATCAGTAGCACAGCACGAACAAGAGGTGGTGGAGTTGGCTTTGAACTTGGCTTCCACTTGTTTAGAAGTGGTCTATGCTGACTTCGTATCTGTGAAGGAAAACAAAAGACTCGAGTATCACAGAAAGTTGCTGACTAGAGGGGTTGGGGATTTGGAGATGGAGAATCGCAAGGCAGAGGAATGGGCTAGCCAGCTTCAGTGTTGGTCCCTTTACCTTCTGAATTGCTTTGCTTGCAAAGATAGGTCTCTGGATCTCATCTGCAAAAAGGTGTTTCTCAAGGACTTGTGCGATATGTGGGGTGGTTTGATAAATCACACGTCACCAGCAGGGGTTGGACTGATTAGAATATTGTGTTATAGCAAAGTAGGAAGGAAAAGCATTGCTGAATTACCAAAAGTTGTCAACACTCTAGGTAACCTTTCAAGATCTTCAGATGATTGGCAGTACATAGGTATTGATTGTCTTCTCCTCCTTCTCAAGGACCCAGATACGAGGTACAAAGTTATTGATGTTGCTGCTTCTCACCTTGTTGATTTGATTGAACTTAGAAGCCTTGGAGATAAATCCAACGTAGGCGAGACCATATCAAAGGTTCTCCTTAATTTGAAACCTAACAGACAAAAGGTTGCAGCAACATTGCAAGAGGTGGTGGATAGGAGGAACAAGGAGAAGCTAGTCTCGGAGGAAAAGTTAGAGGAAACAAGGGTTTTGGTGAGTTTGATAAAGCAACAAGCGAATCACATGTTCAGGATGGGAAAGGTGGAAGAGGCTTTAGTGAAATACTGTGAAGCACTTGGTGTTTGTCCCTTGAGGTTTAGAAAAGAGAGAATGGTGATTTATAGTAACAAAGCGCAGTGTCATATTTTGCTTAAGAACGCAGATTCAGCGATCAGTGACTCAACGCGTGCTCTTTGCCTGTCCAACCCAGCAAACACGAATAGGAAAAGCCTTTGGAGGAGGTCACAGGCATATGACATGAAAGGAATGGCCAGAGAGAGCCTCATGGACTGCATAATGTTCATCAACAGTTGCATCAAGTCGGGTGAGACTGAGACCATGCGTGTCAAGATTCCTTACCACGCAGCGCGCATGATCTCCAAACACATGGAGGCCACGTGGCTCTTTGCCACTGCTCGCTCAAAGGTGGACAAAACAACGCAAGAAATATTGAACCAAGTTGGCGGGGATGATCAGAACGGGGTCAACCATGAAGAGCAACCACGTGATCATAAGGCGAAGATGATCATGGTGGAAAACAGAAACAGTCTCATACACGGTCTGTCAACCATTATTGAAGAGCCTTTTCACGCAAAAGAAGCCGGTAGGAGAAAGATGGAAAGGGCGAGAAGGAGAATCAACAAAGGTGTTGTGGCTCGACCAACGTTAGAAATCGAACTAATAAGGTTCTCTAATCTATTTTACATATTGAAAATGGTAAATGGAGTAGTACTGAAGAAATTCGAGGAAGACGAACTGCCGCGAAGCTTCCAGAGCGTGGGCCTGGTGATCGGCGTGACGGGCATCGTGGGCAACAGCCTCGCCGAGATCCTCCCTCTCGCCGACACCCCCGGCGGCCCATGGAAGGTGTACGGCGTGGCACGGCGGCCGCGGCCGCCTTGGAACGCCGATCACCCGGTCGAGTACATCCAGTGCGACGTCTCCGATCCTGCCGACGCCGAAACGAAACTCTCCGTCTTGAGCGACGTCACTCACATCTTCTTCGTGTCGTGGACCAACCGCCCCACCGAGGACCGAGAACTGCGAAGTCAACGGCGCCATGTTACGGAACGTGCTTCGCGCCGTTATCCCGAACGCCCCCAATCTCCGCCACGTGTCACTCCAGACAGGCGGCAAGCACTACCTCGGACCCTTCGAACTCATCGAGGATATCCTCTTCGAAGAAACCGTTTAATGAACATGATTGGGACTATTTCCGTGTACGCCGCAATTTGCAAGCACGAGGGGGTTCCGTTGAGATTCCCCGGCACCAAGAGCGCGTGGGAGAGTTATGCTTGTGCTTCCGATGCGGATTTGATTGCGGAGCAGCATATTTGGGCCGCGGTTGATCCCTACGCGCGGAACGAGGCGTTTAACTGCTCCAATGGTGATGTGTTCAGGTGGAAGCATCTTTGGAAGGTGTTGGCGGAACAGTTTGGGATTGAGGAGTATGGGTTTGAGGAAGAAGGTTCGCGTTTGAGGTTGTCGGAGCTTATGAAGGATAAGGGTCCTGTTTGGGACGAGATTGTCAGTGAGAATCAGCTTCTGCCTACCAAGCTTGACGAGGTTGGTGATTGGTGGTTTGTGGATCTTATATTCTCAGGGGAGGGCATGTTAGATAGCATGAACAAGGCTAAGGAACATGGGTTTTTGGGATTCAGGAATTCCAAGAATTCATTAATAAGTTGGATAGACAAGACCAAGGCCTATAAGATTGTGCCTTGA 2991 0.4845 MKSQMKKKQVTPIPKTPCDTSDHMTEGSRDQHCINPCCFFCSMREPDSSLRRAGIATCFKEMPQGENHEHVLVLSGLWHIAMTQPNDPEFPSLGIFKCMASLIHRGINDRHWLLTNQNIYIPYYAAHIIGSYTMNKEEFAQLAVKSGVIPPLLDLLRGKISWVEQRVAVRALGHLASYKSTFESVAQHEQEVVELALNLASTCLEVVYADFVSVKENKRLEYHRKLLTRGVGDLEMENRKAEEWASQLQCWSLYLLNCFACKDRSLDLICKKVFLKDLCDMWGGLINHTSPAGVGLIRILCYSKVGRKSIAELPKVVNTLGNLSRSSDDWQYIGIDCLLLLLKDPDTRYKVIDVAASHLVDLIELRSLGDKSNVGETISKVLLNLKPNRQKVAATLQEVVDRRNKEKLVSEEKLEETRVLVSLIKQQANHMFRMGKVEEALVKYCEALGVCPLRFRKERMVIYSNKAQCHILLKNADSAISDSTRALCLSNPANTNRKSLWRRSQAYDMKGMARESLMDCIMFINSCIKSGETETMRVKIPYHAARMISKHMEATWLFATARSKVDKTTQEILNQVGGDDQNGVNHEEQPRDHKAKMIMVENRNSLIHGLSTIIEEPFHAKEAGRRKMERARRRINKGVVARPTLEIELIRFSNLFYILKMVNGVVLKKFEEDELPRSFQSVGLVIGVTGIVGNSLAEILPLADTPGGPWKVYGVARRPRPPWNADHPVEYIQCDVSDPADAETKLSVLSDVTHIFFVSWTNRPTEDRELRSQRRHVTERASRRYPERPQSPPRVTPDRRQALPRTLRTHRGYPLRRNRLMNMIGTISVYAAICKHEGVPLRFPGTKSAWESYACASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFRWKHLWKVLAEQFGIEEYGFEEEGSRLRLSELMKDKGPVWDEIVSENQLLPTKLDEVGDWWFVDLIFSGEGMLDSMNKAKEHGFLGFRNSKNSLISWIDKTKAYKIVP 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00342 996 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 684 905 IPR036291 -
Pumo10g00342 996 SUPERFAMILY ARM repeat 113 400 IPR016024 -
Pumo10g00342 996 Gene3D Tetratricopeptide repeat domain 425 542 IPR011990 GO:0005515
Pumo10g00342 996 SUPERFAMILY TPR-like 422 521 IPR011990 GO:0005515
Pumo10g00342 996 SMART arm_5 136 177 IPR000225 GO:0005515
Pumo10g00342 996 MobiDBLite consensus disorder prediction 767 787 - -
Pumo10g00342 996 MobiDBLite consensus disorder prediction 1 18 - -
Pumo10g00342 996 MobiDBLite consensus disorder prediction 767 801 - -
Pumo10g00342 996 Gene3D - 681 781 - -
Pumo10g00342 996 Gene3D - 811 996 - -
Pumo10g00342 996 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 29 629 - -
Pumo10g00342 996 MobiDBLite consensus disorder prediction 1 25 - -
Pumo10g00342 996 Gene3D - 97 424 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00342 Pumo-Chr10 4539567 4548351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00342 - - gmx:100777591 1129.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00342 10 4539567 4548351 Pumo10g00342 10 4539567 4548351 ECH