Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00339 ATGGCGTCGAGTTTTGATCGATGGGAAAAAGATCCTTTCTTTAATGCCGCCGAAGAAGTTCAGGAATCTGCAGACAGGATGGAATCTACATATAGAACATGGATTCATGCAATGAGAGATGCGTCCAACCCATGGAACTGTGATGAACTCCGCCGAGATCTACAAACTACCCTTGGCACTGCTAAATGGCAGTTAGAGGAATTTGAACGAGCAGCTAGGTCAAGTTATAGCAAAGTTTCAAGTGAGGATGCTAGAAATAGGCACCGGGATTTTATTGATGCCATTGGTGACAAGATTAAGAAAGTTGAACATTTGTTACAAGAATCTGTTCATTCAGGTAGCAAGGCATCTCTGCCTTGGACGCGTCTGGATGAAGGAGAACGAGATGAGCTTGCATCGTTTCTTTCGGGAATACCGGCTGCTGGGGGCAAAGTTCCCATTAAATGTGTTGGCAGAGACTGTGAAAGTCTGCCATTAATTGACAAAGATTCGTTCACTAATTGTTCAAGCAATTTACATGTTTCATCTGAAGTAGTGCACGAGAAATCACATGGGCATCGCAGGGCAGCTAGTGCTGATGCTGATATTGGTTCTTGGAAAATCACTGTTTCTGACGATGTGCAACAATCGAGTTCCTCTAATGGTTCTTCTGGTCCTATTCCTATGCATAAGGTAGCTAGTCTCTCTGGGTTTTTTGGTTCCATGGAAACCATCTCTAAGTTGAAGTGGCCTAAGAATGGTTATAGAAAGCTGAAAGCGATAAATCATTGTGAAGAAATGGATAATGCACTACTACCACCAGCTGGATTGAATGGGGGCATCAATGCATACTATGAAAGAAGTAAGAGTTGCCTTGATAATTGTGATGAATGTTATGATAAGCAACTCCATGGGTGGTACGGAGCTTTGCAAAGGCAGCTTCAAAGATCTCAATACCAAATGCAATACAATCGGCATGTTCAAATAACCGTCTGGGCTGTTATTCTCCTTTGCTTGATTGTTTTAATTGCTTTTTGCACGATGTAG 1026 0.423 MASSFDRWEKDPFFNAAEEVQESADRMESTYRTWIHAMRDASNPWNCDELRRDLQTTLGTAKWQLEEFERAARSSYSKVSSEDARNRHRDFIDAIGDKIKKVEHLLQESVHSGSKASLPWTRLDEGERDELASFLSGIPAAGGKVPIKCVGRDCESLPLIDKDSFTNCSSNLHVSSEVVHEKSHGHRRAASADADIGSWKITVSDDVQQSSSSNGSSGPIPMHKVASLSGFFGSMETISKLKWPKNGYRKLKAINHCEEMDNALLPPAGLNGGINAYYERSKSCLDNCDECYDKQLHGWYGALQRQLQRSQYQMQYNRHVQITVWAVILLCLIVLIAFCTM 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00339 341 FunFam Syntaxin 10 8 109 - -
Pumo10g00339 341 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Pumo10g00339 341 CDD SNARE_NTD_STX6-like 11 103 - -
Pumo10g00339 341 Gene3D - 9 110 - -
Pumo10g00339 341 PANTHER OS05G0443700 PROTEIN 1 333 - -
Pumo10g00339 341 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00339 Pumo-Chr10 4525834 4528974 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00339 - - gmx:100795867 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00339 10 4525834 4528974 Pumo10g00339 10 4525834 4528974 ECH