Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00285 ATGATTCAAAGAACGGTGTCGTTTCCCAGTTTAAGGAAATTGCTTCTTCGGGCTGCTTCTGCTTCGTCCAAGATCGGAACTTACAATTGCTTTGCTTCTCAGCCTTCATCTCTTCGAAGCCCTAACCCTAGTTACAGTAGTGATGAGTATGCTGACGTGGACTGGGACAGTATTGGATTTGGACTCATGCCCACTGATTACATGTACATTACTAAATGTTGTGAGGGCCAAAATTTTGGACAAGGACAACTTAGTCGTTATGGGAACATTGAATTCAGTCCATCAGCTGGGGTCCTAAATTACGGTCAGGGGTTATTCGAAGGCACCAAAGCATACAGAAAAGAAAATGGGCACTTACTACTGTTCCGTCCAAAACAAAATGCCATTCGCATGAAGATTGGTGCTGAAAGAATGTGCATGGCATCCCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCTTAGGAACTGGTCCAGTTTTGGGTTTGGCTCCCGCACCTGAATACACATTCCTCATATTTGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGTTCGGCTCCGCTCAACTTGTACGTGGAGGAGAACTTTGACCGTGCTTCTAGCCGTGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTTTTGATGGCACAACTTAAAGCCAAGAAAAGGGGATTTTCGGATGTGCTATACCTTGATTCAGCTACCAAAAAAAATCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACCAATGGAACTATTCTTTCCGGAATTACTCGAAAAAGTGTCATTGAAATTGCTCGTGATCATGGCTATCAGGTAGAAGAGCGTGTTGTTGGCGTGGATGAATTGATTGAGGCTGATGAAGTTTTCTGCACAGGAACTGCGGTCGGTGTTGCTCCCGTAGGGAGTATCACATACCAGGATAAAAGGATGGATTATATAACAGGTTCTGGAACCATTTGTCAAGAGCTGAACAATACCATTTCAGGAATTCAAACGGGTACTATTGAAGATAAGAAGGGATGGATTGTTGAAGTTGATTAA 1158 0.4396 MIQRTVSFPSLRKLLLRAASASSKIGTYNCFASQPSSLRSPNPSYSSDEYADVDWDSIGFGLMPTDYMYITKCCEGQNFGQGQLSRYGNIEFSPSAGVLNYGQGLFEGTKAYRKENGHLLLFRPKQNAIRMKIGAERMCMASPSIDHFVDALKQTVLANKRWVPPPGKGSLYLRPLLLGTGPVLGLAPAPEYTFLIFASPVRNYFKEGSAPLNLYVEENFDRASSRGTGNVKTISNYAPVLMAQLKAKKRGFSDVLYLDSATKKNLEEVSSCNIFIAKGKCISTPATNGTILSGITRKSVIEIARDHGYQVEERVVGVDELIEADEVFCTGTAVGVAPVGSITYQDKRMDYITGSGTICQELNNTISGIQTGTIEDKKGWIVEVD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00285 385 Pfam Amino-transferase class IV 104 342 IPR001544 GO:0003824
Pumo10g00285 385 ProSitePatterns Aminotransferases class-IV signature. 268 297 IPR018300 GO:0003824
Pumo10g00285 385 Gene3D - 213 384 IPR043132 -
Pumo10g00285 385 FunFam Branched-chain-amino-acid aminotransferase 213 384 - -
Pumo10g00285 385 PIRSF BCAT1 33 385 IPR005786 GO:0004084|GO:0009081
Pumo10g00285 385 NCBIfam branched-chain-amino-acid transaminase 81 384 IPR005786 GO:0004084|GO:0009081
Pumo10g00285 385 CDD BCAT_beta_family 93 372 IPR033939 GO:0004084|GO:0009081
Pumo10g00285 385 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 45 381 IPR036038 GO:0003824
Pumo10g00285 385 PANTHER AMINO ACID AMINOTRANSFERASE 35 384 IPR005786 GO:0004084|GO:0009081
Pumo10g00285 385 Gene3D - 32 212 IPR043131 -
Pumo10g00285 385 FunFam Branched-chain-amino-acid aminotransferase 35 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00285 Pumo-Chr10 3852875 3859707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00285 K00826 - gmx:100782644 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00285 10 3852875 3859707 Pumo10g00285 10 3852875 3859707 ECH