Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00278 ATGTCTTGTATATGTTTTGGTGGAGGAAGCCATCAAAGTCAGATGGGGAAAAGTAAGGTTGCAACGTTGCTGCTTTGGGTCTTGTTTGTCTCGTGTGCCACAGCAAGCAAATTATCACCTTTAGAAATTGAAATAGAAGCCAAATTAAAACTCCTCAACAAGCCTGCGGTGAAAACCATTAAGAGTGAAGATGGGGATATTATGGACTGCGTCGATATATACAAACAACCTGCTTTTGACCATCCTGCCTTAAAAAATCACACTATTAAGTCTGTTATATTTCAGACATGGCAGAAAAGTGGAAGTTGTCCAAACGGAACTGTCCCTATTCGCAGAATTTTAAAGGAGGACTTACTCAGAGCAGCTTCTCTTCATCGCTTCGGCCAGAAACCCCCTGCGGTCTTTAAGAATTCAACAATCGGATTCAACCATAATTTTTTCAACCCCAATGACTTCAATGTATCTGTTCCAGAAAATCGCTCGGCAGCATATCTTGTGGCAATGGGATACAATTATATAGGCGCAGAAGCAGATATTAACACTTGGAATCCAAAGGTTGACTTGCCAGATGATTTCACCACTGCTCAAATATGGCTTAAGGCCAGCAATGGTCTTGATTTTGAAAGTGTTGAAGCAGGCTGGATGGTGAATCCTAAGTTATATGGTGATAAAAACACCCGACTGTTTGCCTACTGGACTAGGGATTCATACAAGTCAATAGGTTGCTTTGATCTTACTTGCCCTGGGTTTGTGCAAATAGGCACCGAAGGTGTGCTTGGTGCCACCATAACACCTGTGTCATCCCAACATGGCCAACAGTATGATCTCAACGTTGGAATGTTCTTGGATGATTCAGGGAATTGGTGGCTTAGAATAAAGAACAACATCCCTATAGGTTATTGGTCGGCCGAATTAATGGGGAATTTAAAACACAGTGCTATATTGGTTGAATGGGGTGGACAAGTATTCAGTTCGCAGATTAAAAAGCAAAGCCCTCACACAGGAACAGGGATGGGAAGTGGAGATTTCGCAAATGGTTTATGGGGGAACGCATGCTTTATGAGGAATGTGAGGATAAAGGATTATTCGCAACAGCTTAAGTACCCTAAATTTGTAAGTGCAAAGGCTGATGAACCCTACTGTTACAACTCCCTCAATTACATAAAAGCCTATGGAGTGGAGCCTATCCTATATTTTGGAGGGCCAGGACGAAGACCTCCCTATTCAAGAGCATCATCATCATCACCGTTAGAAACAGAAATCGAAGCCAAATTGAAGCAACTCAACAAGCCTGCCGTGAAAACCATTAAGAGTGAAGATGGAGATATTATTGATTGCGTCAACATTTACGAGCAACCTGCATTTGATCATCCAGCCTTAAAAAACCACACTATCAAGATGATGCCAAATTTTCTGCTAGAATCCCAAAATTCAAGCACAGAAGATGCGTCTGAGTCAGAGATATTTCAGACATGGCAGAAAAGTGGAAGCTGTCCAAAAGGAACAATCCCTATTCGCAGAATTCTAAAGGAGGACTTACTCAGAGCTGCTTCTCTTGACCGCTTTGGGCAGAAATCCCCTGCAGTGTTTAAGAATTCAACAAACGGCTTCAACCTTAATTTCTCCGGTGTCGACAGTGCATTTATTCCAGAAAATCGCTCGTCATCATATCTTGTGACATTGGGATTCAATTATATTGGTGCACAAGCAGACATTAACGTTTGGAATCCAAAAGTTGCCATGCCAAACGATTTCACCACAGCTCAAATCTGGCTTAAGAACAACAACGGTGACTTTTTTGAAAGTGTCGAATCAGGTTGGATGGTGAATCCCAAGTTATATCGTGATGGAGCCACCCGATTTTTTGCCTACTGGACTAGGGATTCATACAGGTCAACTGGTTGCTTTGATCTTACTTGCTCGGGATTTGTGCAAACAGGGCAGGTAGTGCTTGGTGGTACCATAGGACCTATATCATCCACTATGGGCCCACAGTATGACCTTAACGTTGGATTGTTCCTGGATCCAGACTCAGGAAATTGGTATCTTAAAGTGAAGAACAATGTCCCAGTGGGTTATTGGCCGGCTGAAATATTGGGGTCTTTAACACACAGTGCCATATTGGTTGAATGGGGGGGACAAGTATCAAGTACAAATATTAAAAAGGAAACCCCTCACACGGGAACACAAATGGGAAGTGGAGATTTCGCAAGTGGTCGATTTCAGAACGCGTGCTTCATGCGCAATGTGAGGATTAAGGATTATTCGCAACAGCTTAAGTATCCTCGAAATGCATATGCAATGGCTGAAGAGCCCTACTGTTACAGCTCCCTCAATGACGTCAAATATGGGGTGGACCCTGTCTTTTATTTTGGAGGGCCCGGACGAAAGCCACCCTATTGTCTTTGA 2409 0.4288 MSCICFGGGSHQSQMGKSKVATLLLWVLFVSCATASKLSPLEIEIEAKLKLLNKPAVKTIKSEDGDIMDCVDIYKQPAFDHPALKNHTIKSVIFQTWQKSGSCPNGTVPIRRILKEDLLRAASLHRFGQKPPAVFKNSTIGFNHNFFNPNDFNVSVPENRSAAYLVAMGYNYIGAEADINTWNPKVDLPDDFTTAQIWLKASNGLDFESVEAGWMVNPKLYGDKNTRLFAYWTRDSYKSIGCFDLTCPGFVQIGTEGVLGATITPVSSQHGQQYDLNVGMFLDDSGNWWLRIKNNIPIGYWSAELMGNLKHSAILVEWGGQVFSSQIKKQSPHTGTGMGSGDFANGLWGNACFMRNVRIKDYSQQLKYPKFVSAKADEPYCYNSLNYIKAYGVEPILYFGGPGRRPPYSRASSSSPLETEIEAKLKQLNKPAVKTIKSEDGDIIDCVNIYEQPAFDHPALKNHTIKMMPNFLLESQNSSTEDASESEIFQTWQKSGSCPKGTIPIRRILKEDLLRAASLDRFGQKSPAVFKNSTNGFNLNFSGVDSAFIPENRSSSYLVTLGFNYIGAQADINVWNPKVAMPNDFTTAQIWLKNNNGDFFESVESGWMVNPKLYRDGATRFFAYWTRDSYRSTGCFDLTCSGFVQTGQVVLGGTIGPISSTMGPQYDLNVGLFLDPDSGNWYLKVKNNVPVGYWPAEILGSLTHSAILVEWGGQVSSTNIKKETPHTGTQMGSGDFASGRFQNACFMRNVRIKDYSQQLKYPRNAYAMAEEPYCYSSLNDVKYGVDPVFYFGGPGRKPPYCL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00278 802 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 421 796 - -
Pumo10g00278 802 Pfam Neprosin 190 402 IPR004314 -
Pumo10g00278 802 Pfam Neprosin 583 794 IPR004314 -
Pumo10g00278 802 Gene3D - 176 293 - -
Pumo10g00278 802 Gene3D - 572 690 - -
Pumo10g00278 802 Pfam Neprosin activation peptide 435 529 IPR025521 -
Pumo10g00278 802 Pfam Neprosin activation peptide 59 134 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00278 Pumo-Chr10 3713706 3740426 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00278 - - tpra:123895759 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00399 9 6402028 6406544 Pumo10g00278 10 3713706 3740426 PCT