Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00235 ATGGAAGGGATAAAGCAATTTGCGTACGACAGTGCGGTGAAGCTGGTGCTGGGTGCACTGGAACGCAACGTGCTCCCTGACGCCGTCACCAGGAGATATGCGCGCGTGATGGCGGCTAATCGCCTTCGCTCTGGTTACAAACCATCCTCCCAACTTCAACTCTCCGATCTCCTCCACTTTGCGCATTCTCTACAAGAGATGCCCGTAGCAATCGACACTTATGAGCCAAATTCTCAACAGTATGAATTACCAACCGCTTTCTTCAAGTTGGTGCTCGGAAACAATCTCAATTACAGCTGTTGCTATTTCCATTCTGCCTCAATGACACTGGAAGATGCTGAAGAAGCAATGTTGAAACTGTGCTGCGAGAGATCAAACCTGAAAGATGGTCATACAGTACTTGATTTGGGATGCGGTTGGGGATCTCTGGCTTTGTACATTGCCAAGAAGTACACTAACTGCAGGGTTACAGGAATCTGCTATTCCACAACTCAGAAGGCTTATATTGAGGAGAAGTGCCGGGATCTTCAGCTGCAAAATTTGAATACAATAGTTGCTGATGTCAGCATGTTTGAAATGGAAGCTTCTTATGATAGAATATTTTCCATAGAAATGTTTGAGCATATGAAGAACTATAAAGATCTTCTCAAGAAGATATCCAAATGGATGAAAGAGGATAGCCTTTTATTTGTTCATTACTTCTGCCACAAAGCATTTGCCTACCACTTTGAGGACAAAAATGTAGATGACTGGATTACAAGATACTTCTTCGCTGGAGGAACTATGCCTTTAGCAAATCTACTTCTTTATTTCCAAGATGATGTTACAGTCATCAACCATTGGCTACTAAATGGGAAACACTCCGCACAGACCAGTGAAGAATGGCTGAAAAGAATGGACCAGAGAATGACTTACATCAAGCCAATTATGGAATCAACGTATGGCAAGGATTCAGCTACCAAGTGGACTGCCTATTGGAGAGCATTCTTCATAGTTGGAGCAGAATTTTTCGCATACAATAACGGTCCAAGAATCGAGACCAATGAGGTGCTTAGCGACAAAAACGGTGTTCTGCGGGTTCATGGCAACTTGGTTCTTAGCACCGTTAGGTTTTGTATTGGTTGTGTGAATGTGAAATTGGATCTTCAGTTGCAAAATTTGAATATTATAGTCGCTGATATTAGCACATTTGAAATGGAGGCTTCTTATGACAGAATATTTTCCATAGAAATGTTTGAGCATATGAAGAACTATAAAGATCTTCTCAAGAAGATATCCAAATGGATGAAAGAGGATAGCCTTTTATTTGTTCATTACTTCTGCCACAAAGCATTTGCCTACCATTTTGAGGTGAACCCAACATAA 1365 0.4161 MEGIKQFAYDSAVKLVLGALERNVLPDAVTRRYARVMAANRLRSGYKPSSQLQLSDLLHFAHSLQEMPVAIDTYEPNSQQYELPTAFFKLVLGNNLNYSCCYFHSASMTLEDAEEAMLKLCCERSNLKDGHTVLDLGCGWGSLALYIAKKYTNCRVTGICYSTTQKAYIEEKCRDLQLQNLNTIVADVSMFEMEASYDRIFSIEMFEHMKNYKDLLKKISKWMKEDSLLFVHYFCHKAFAYHFEDKNVDDWITRYFFAGGTMPLANLLLYFQDDVTVINHWLLNGKHSAQTSEEWLKRMDQRMTYIKPIMESTYGKDSATKWTAYWRAFFIVGAEFFAYNNGPRIETNEVLSDKNGVLRVHGNLVLSTVRFCIGCVNVKLDLQLQNLNIIVADISTFEMEASYDRIFSIEMFEHMKNYKDLLKKISKWMKEDSLLFVHYFCHKAFAYHFEVNPT 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00235 454 PANTHER - 1 346 - -
Pumo10g00235 454 Pfam Mycolic acid cyclopropane synthetase 76 326 - -
Pumo10g00235 454 CDD AdoMet_MTases 132 234 - -
Pumo10g00235 454 Pfam Methyltransferase domain 385 437 IPR013216 GO:0008168
Pumo10g00235 454 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 382 448 IPR029063 -
Pumo10g00235 454 FunFam Cation-transporting ATPase 69 347 - -
Pumo10g00235 454 Gene3D Vaccinia Virus protein VP39 378 453 IPR029063 -
Pumo10g00235 454 Gene3D Vaccinia Virus protein VP39 72 345 IPR029063 -
Pumo10g00235 454 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 79 342 IPR029063 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00235 78 326 Acyl Lipid Metabolism Gene Families AT3G23510 28.740 2.82e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00235 - - gmx:100807054 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00235 10 3199622 3227708 Pumo10g00235 10 3199622 3227708 ECH