Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00232 ATGCACCCACCTGCTAGTCAGCACAGCAAGAAGGCAATGGATATGAGGTTGATGGATTTGGAATCTCCACTGTTGAACACTCTGCACCGAATCATGGATCTGACGGAGGACGCTGAGAAGAACTTGAATGCTCCGACGCGGACATACGTGCAGGACGCGAAGGCAATGGCTGCGACTCCTGCTGACGTGAAGGAGTACCCTCACTCTTACGTGTTCGTGATCGACATGCCTGGCCTGAAATCTGGGGACATTAAGGTGCAGGTGGAGGACGCCAACGTGCTTCTCATAAGCGGTGAGAGGAAGAGGGACGAGGAGAAAGAAGGTGCAAAGTATTTGAGGATGGAGAGAAGGGTTGGCAAGTTCATGAGGAAGTTCACGCTTCCCGAGAATGCTAACACCGATGCTATCTCTGCCGTCTGTCAAGACGGTGTGCTCACTGTCACTGTCAACAAGCTGCCTCCTCCTCAGCCCAAGACCATCCAGGTTAAGATTGCCTGA 498 0.5261 MHPPASQHSKKAMDMRLMDLESPLLNTLHRIMDLTEDAEKNLNAPTRTYVQDAKAMAATPADVKEYPHSYVFVIDMPGLKSGDIKVQVEDANVLLISGERKRDEEKEGAKYLRMERRVGKFMRKFTLPENANTDAISAVCQDGVLTVTVNKLPPPQPKTIQVKIA 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00232 165 Gene3D - 18 164 IPR008978 -
Pumo10g00232 165 FunFam 17.3 kDa class II heat shock protein-like 23 164 - -
Pumo10g00232 165 Pfam Hsp20/alpha crystallin family 62 163 IPR002068 -
Pumo10g00232 165 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 52 165 IPR002068 -
Pumo10g00232 165 SUPERFAMILY HSP20-like chaperones 27 164 IPR008978 -
Pumo10g00232 165 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 25 162 IPR031107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00232 Pumo-Chr10 3118680 3119359 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00232 K13993 - gmx:111605749 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00232 10 3118680 3119359 Pumo10g00232 10 3118680 3119359 ECH