Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00224 ATGTACGGCCTCGACAGAGAACAACAAAGGCTCAGGTTCCAAAACCACGCTAAAAACCCCTCCTTCTCTTCCACTCTCCTCGATCAAATCTACCGCTCCATCGACGAAGGTGAGAGGAAGAGCAGCGACATGAAGTTCTACAACGAAACAATGGCGAAGAAACAGAACAGAGTCGTCGAACAAGAGTTAAATCGCGTTGAAAAATGGAAAGGAAGCGACACTCAAAGGAGGCAATGGAAAACACAAATGGAGGCTAAATCGCGTTGTCATCATCACGAACATGACCAGGAGGTAATGTTCTTCAGTTCAACTTCGAGTTCCTCGGATTCTAGTTCTGGATTGCTGTCCTCTTCTGACACGGAATCATTGTACGGAATGAGATCGAAATCGCGAGTTTCGTGTTTCGCCCCTTCGAGGCCCAAGCCAGTGATGACGTCAGCGAGTAACAAAGAGGGTTTAATAAAGTCAAAATCGAGGGCGTTGAAGATTTACAACAATCTGAAGAAGGTGAAGCAGCCAATCTCTCCAGGTGGCAGGCTCAGTAATTTTCTTAACTCTCTGTTCGCGACAGGGGGGAACGTTAAGAAAACCAAAACCTGCGACGAGGCAAAAGCTTCCTATTCGGGACAGGAGTCCACGTGTTCCTCGGCGTCCTCGTTCTCACGCTCCTGTTTAAGCAAGGCTACACCTTCCTCTAACAAGTTGCGTGACGGGGTTAAGCGAACGGTGCGTTTTTACCCCGTGAGTGTGATCGTGGACGAGGATTGTCGACCGTGTGGGCATAAGAGTTTGTTTGAAGAGGACACGCGCGTAATGGCGTTGTCTGTGCCAACCGCGTGGAAAATTGGCCGCAAGAAGAACCAAGAAGAAGAAGAATTAAAGGTCGTTGATAAGACCAGGCACGTGGAAGAGGCTGCTAGAGAGTTCTTGAAAGAGTACCATCGCAGCCAGAAGAAGAGTGATTTGATTAATTTGAGGGATTTTCCTAATTTGGATGTGGAAGATGATGATGAAGATGATGCGGCGAGTTATTCAAGTTCGGATTTGTTCGAGCTTGATCACCTAGCGGTGATGGGAAATAATAGGTATCGTGAGGAGCTTCCCGTTTACGAAACTACTCATGTTAGTACTAATCGCGCCATTGCTAATGGCCTCATATAA 1161 0.472 MYGLDREQQRLRFQNHAKNPSFSSTLLDQIYRSIDEGERKSSDMKFYNETMAKKQNRVVEQELNRVEKWKGSDTQRRQWKTQMEAKSRCHHHEHDQEVMFFSSTSSSSDSSSGLLSSSDTESLYGMRSKSRVSCFAPSRPKPVMTSASNKEGLIKSKSRALKIYNNLKKVKQPISPGGRLSNFLNSLFATGGNVKKTKTCDEAKASYSGQESTCSSASSFSRSCLSKATPSSNKLRDGVKRTVRFYPVSVIVDEDCRPCGHKSLFEEDTRVMALSVPTAWKIGRKKNQEEEELKVVDKTRHVEEAAREFLKEYHRSQKKSDLINLRDFPNLDVEDDDEDDAASYSSSDLFELDHLAVMGNNRYREELPVYETTHVSTNRAIANGLI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00224 386 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 11 386 IPR039621 GO:0009734
Pumo10g00224 386 Coils Coil 44 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00224 Pumo-Chr10 3036644 3038526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00224 - - gmx:100802581 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00224 10 3036644 3038526 Pumo10g00224 10 3036644 3038526 ECH
Pumo10g00224 10 3036644 3038526 Pumo7g00427 7 6655686 6657494 ECH
Pumo10g00224 10 3036644 3038526 Pumo9g00470 9 7355340 7356533 ECH
Pumo4g00660 4 8644439 8645752 Pumo10g00224 10 3036644 3038526 ECH
Pumo7g00427 7 6655686 6657494 Pumo10g00224 10 3036644 3038526 ECH