Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00214 ATGCTAAGTTGCTTTGCTCACAACAACACAAAAAAAAACCGATTACCGGCGACGATGCTAGCTTACCTGGAACACTTCGTTCACGGAAACGACGCCGAATCGAGGCAAGACGACGACTTAGCGAGCCTCTCCAAAGCGCTTGAGCTTCAAGCCAGCATCGACGAATTCGGTCCCACCGGAATCGCCAGCAAGGATTTCGGCGGCATGAAGTCCGTCAAACCCTTGGCCCTCATCAGACCCTCCGCCGCCGCCGACGTCGCCAGAGTCGTGAAACACGCGGCGGAGTCGCCGAGCCTGACGGTGGCGGCGCGCGGGAACGGCCACTCCATCAACGGCCAGGCCATGACGGAGCAGGGACTGGTCCTCGACATGCGCGCCATCCAGGACCCTTTTGAGATTCTCTGGATAGAAGGTTCTCCCTACGTCGACGTTTCGGGAGGGGCATTATGGGAAGACGTCCTTAAACGCTGCGTTTCGGAGTTTGGCCTAGCCCCGAGGTCCTGGACGGATTATCTCAGCTTAACGGTGGGCGGAACACTCTCCTACGCCGGCGTCAGCGGTCAAACGTTCCGATACGGTCCTCAGACATCCAACGTAACGGAATTGGAAGTTGTAACTGGCAAAGGCGAAACGCTGTGCTGCTCCCAAACACAAAACTCTGAGCTTTTCTTTGGCGCGCTTGGTGGCTTAGGACAGTTCGGTATCATTACCAGAGCCAGGGTCGTTCTTCAACAAGCTCCAGATATGGTGAGGTGGATAAGAGTGGTATACTCTGAATTTGAGGACTATGCTGGGGATGCAGAGTCGCTGGTGGAGGAATTAGAGGAATGTTTTGATTACGTGGAAGGGTTCGTCTTGGTGAACAGTGACGACCGGGCCAATGGATGGCCCACAGTGCCATTGGGCCCGGAAAAAGTGTTCGACCCGATTCATATTCCTTCCACCGCTGGTCCTGTCTTGTATTGCTTGGAGCTCGCTCTTCACTATTGTAACGCGGATCATCCTTCACGTGTTGATACGGATGTGGATCGATTGCTTGGACGGCTACGATTCATTCAGGGTCTGAAGTTCCAGGTGGATGTGACATACATGGAGTTCTTGCTACGTGTAAAGCGTGTGGAGGAGCACGCAAAAGCCAACGGAACCTGGGATGCACCTCACCCTTGGCTCAATCTGTTCGTGTCCAAGTCCCACATCGTTGATTTTGATCGTGAGGTCTTCAAGAAGATTCTCAAGGACGGAGTCGATGGACCCATTTTAGTCTACCCGCTCTTGCGAAACAAGTGGGATAGTCGTCACTCGGTGGTGGTGCCGGACAGCGATGTGTTCTACATAGTAGCCTTGCTCCGATTCACTCCACCACCCCCAAAGGGTCCACCAGCTGAACTTTTGGTGGCGCAAAACAATGAGATTATTGAGTTCTGCACAAGTAGAGGCCTTGATTTCAAGCTATACTTTCCTCACTACCAATCACGGGAGGATTGGATGAAGCACTTTGGGAACCAATGGGCCAGATTTGTGGAGCGAAAGGCCAATTTTGATCCCATGGCTATCCTTGCACCAGGACAGAAAATTTTCTCCAGAACCTCTCAACCTCAACATAACTAG 1608 0.5286 MLSCFAHNNTKKNRLPATMLAYLEHFVHGNDAESRQDDDLASLSKALELQASIDEFGPTGIASKDFGGMKSVKPLALIRPSAAADVARVVKHAAESPSLTVAARGNGHSINGQAMTEQGLVLDMRAIQDPFEILWIEGSPYVDVSGGALWEDVLKRCVSEFGLAPRSWTDYLSLTVGGTLSYAGVSGQTFRYGPQTSNVTELEVVTGKGETLCCSQTQNSELFFGALGGLGQFGIITRARVVLQQAPDMVRWIRVVYSEFEDYAGDAESLVEELEECFDYVEGFVLVNSDDRANGWPTVPLGPEKVFDPIHIPSTAGPVLYCLELALHYCNADHPSRVDTDVDRLLGRLRFIQGLKFQVDVTYMEFLLRVKRVEEHAKANGTWDAPHPWLNLFVSKSHIVDFDREVFKKILKDGVDGPILVYPLLRNKWDSRHSVVVPDSDVFYIVALLRFTPPPPKGPPAELLVAQNNEIIEFCTSRGLDFKLYFPHYQSREDWMKHFGNQWARFVERKANFDPMAILAPGQKIFSRTSQPQHN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00214 535 Gene3D - 62 527 IPR016167 -
Pumo10g00214 535 PANTHER GULONOLACTONE OXIDASE 47 527 - -
Pumo10g00214 535 Gene3D - 250 485 IPR016170 -
Pumo10g00214 535 SUPERFAMILY FAD-binding/transporter-associated domain-like 62 243 IPR036318 GO:0050660
Pumo10g00214 535 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 247 526 IPR015345 GO:0009690|GO:0019139|GO:0050660
Pumo10g00214 535 ProSiteProfiles PCMH-type FAD-binding domain profile. 70 246 IPR016166 GO:0071949
Pumo10g00214 535 Gene3D - 124 248 IPR016169 -
Pumo10g00214 535 Pfam FAD binding domain 74 214 IPR006094 GO:0050660
Pumo10g00214 535 SUPERFAMILY FAD-linked oxidases, C-terminal domain 247 526 IPR016164 GO:0003824|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00214 Pumo-Chr10 2960312 2964586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00214 K00279 - gmx:100795849 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00214 10 2960312 2964586 Pumo10g00214 10 2960312 2964586 ECH