Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00213 ATGGAGAGGGCTTCGTCGAACCGGCGTCGTTCCGACGGAGAGAGTAGTTCCGCTTCCGCCGAGGACACTCACCGGAAGCGCGCGAGAGTTTACTTTGATTTCGACGGCACTCAGTGTACAATTAAGAAGTCTTTGGATGCTGGGAAGTCCAGTGCATCTGTTGAGGAATTTGGGGATTATGATAATTTTCAAGGATCGTCTCTTCGATCCAACGATGATGCTTTCAGGTTGATGTCTGCTGGTGAGGAGAGTAACTCTGATGAAGGAGATGATAGTGACGTCTCAAAAGTGGATGATCTACAGGTCAAGATGGATCTTACGGATGACTTATTGCATATGGTTTTCTCGTTTTTGGATCATCCCAATCTCTGCAAAGCTGCTAGAGTTTGTAAGCAGTGGCGGACTGCTAGTGCTCATGAAGACTTCTGGAAGAGTTTGAATTTTGAAGATCGGAACATATCTGTAGAGCAATTTGAGGACATCTGTAGGCGTTATCCTAATATCATAGCAATCCGCATGTCGGGTCCTGCCTCTAACCAGCTTGTCATGAAGACCGTCTCTTCGTTAAGAAATCTTGAGGCTTTAACATTGGGAAGAGGACATATAATGGATAATTTTTTCCATGCTTTGGCTGATTGTTCTATGTTGAGAAGACTGAGCATCAATGATGCTATACTTGGCAGTGGTATTCAGGAGATATCAGTTAATCATGACAGGCTGTGTAATCTCCAGTTGACAAAGTGCCGTGTGATGCGTATAGCAGTCAGGTGCCCACAACTTGAAACTATGTCATTGAAGCGCAGTAGCATGGCACAGACTGTGCTCAATTGCCCCCTTTTGCAAGAGCTTGATATAGGCTCTTGCCACAAACTTCCTGATTCCGCCATTCGTTCAGCTGTTACATCATGCCCGCAATTAGTTTCTTTGGACATGTCTAATTGTTCGAGTGTTAGTGATGAAACATTACGGGAAATATCCCTGAATTGTGCTAACCTTAGTTTTCTTGATGCATCATACTGCCCGAATGTATCCTTGGAGACTGTCAGACTGCCAATGTTAACGGTTCTGAAGCTTCACAGTTGTGATGGCATCACTTCAGCCTCAATGGCTGCAATATCTCACAGTTATTTGTTGGAGGTTTTGGAGCTTGATAATTGCAGCCTATTGACATCAGTGTCTTTAGATCTTCCCCGCTTGCAGAATATTAGATTGGTACATTGCCGCAAATTTGCTGATTTGAACTTGATGACCCTAATGCTGTCTTCTATTTTGGTGTCCAATTGCCCTGTTCTCCATCGTATCAACATCACTTCAAATTCACTTCAAAAATTAACAATACCAAAGCAGGATAGCTTAACCACGCTAGCTCTGCAATGCCAATCTTTACAAGAAGTGGATCTCTCTGAGTGTGAATCTTTGAATAACTCTGTATGCAATGTTTTTAATGATGGTGGAGGATGCCCGATGTTGAAATCGTTAGTTCTTGATAATTGTGAGAGTTTGACATCAGTTCAATTCATCAGTACCTCTTTAATCAGTCTTTCCCTTGGTGGTTGCCGGGCAATAACTACTCTTGATCTCACATGCCCTAATCTAGAGAAAGTTATTTTGGATGGCTGTGATCATTTGGAAAGAGCATCATTTTGTCCAGTCGGTCTTTCATCTCTCAATTTAGGAATATGTCCAAAATTGAACACACTCAGCATTGAAGCATCATTTATGGTTTCACTTGAGTTGAAAGGATGTGGTGTACTATCTGAAGCATTCATTAATTGTCCACTCTTAACATCTCTCGATGCTTCCTTTTGCAGTCAACTAACGGATGACTGCTTGTCCGCAACAACTGTCTCATGCCCACTGATTGAATCATTGATATTAATGTCATGCTCATCAATTGGTTCAGATGGTCTTCGATCTCTGTATTGTCTTCCGAATTTGACTGTTCTTGATTTATCATACACTTTCTTGGTGAATATGCAGCCTGTTTTTGATTCTTGTTTGCAACTAAAGGTTTTAAAGCTGCAAGCTTGCAAATATCTCACTGACACATCACTTGAACCTCTTTACAAAGGAGGTGCTTTACCAGCACTTCAGGAGTTGGACTTGTCTTATGGAACTCTCTGTCAGTCAGCCATAGATGAGCTTCTTGCTTGCTGCACAAACCTCACTCATGTGAGCTTGAATGGCTGTGTGAATATGCATGATTTGAATTGGGGAAGCAGTCGTGGGCAGAGTGACAATTTCCCTGCTGTAAACACCCCATCCATGGCAAGTTCTAATGAGAATATTCCTGAATCAAGTGAGCAATCCACTCGCTTACTGCAAAACCTCAACTGTGTTGGATGTCCAAATATTAGGAAGGTTGCCATTCCATTGAGGGCAAATTGTTGTCATTTGTTATTTTTAAACCTTTCGCTCTCAGCAAATTTGAAAGAGGTTGATGTTACTTGTCTCAACCTATGCTTTCTTAATTTAAGCAATTGTTCCTCTTTGGAAATTTTGAAGCTAGAGTGTCCAAAATTGACCAGTCTATTCCTTCAGTCTTGCAATATTGACGAGGAAGCTGTTGAGGCTGCTATATCAAAATGCACTATGCTGGAGACTCTTGATGTTCGCTTTTGTCCAAAGATAAAGCTCAATGAGCATGGGAAGATTACGCACAATTTGTTCAAGTTTGAAGCGTATATTCAGCAGTTAGTCAACTTTGTTACCTTGATCAAGGATATACGCTTTCATAGTGCTTTTATTCACTTGGATTGA 2760 0.4152 MERASSNRRRSDGESSSASAEDTHRKRARVYFDFDGTQCTIKKSLDAGKSSASVEEFGDYDNFQGSSLRSNDDAFRLMSAGEESNSDEGDDSDVSKVDDLQVKMDLTDDLLHMVFSFLDHPNLCKAARVCKQWRTASAHEDFWKSLNFEDRNISVEQFEDICRRYPNIIAIRMSGPASNQLVMKTVSSLRNLEALTLGRGHIMDNFFHALADCSMLRRLSINDAILGSGIQEISVNHDRLCNLQLTKCRVMRIAVRCPQLETMSLKRSSMAQTVLNCPLLQELDIGSCHKLPDSAIRSAVTSCPQLVSLDMSNCSSVSDETLREISLNCANLSFLDASYCPNVSLETVRLPMLTVLKLHSCDGITSASMAAISHSYLLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFADLNLMTLMLSSILVSNCPVLHRINITSNSLQKLTIPKQDSLTTLALQCQSLQEVDLSECESLNNSVCNVFNDGGGCPMLKSLVLDNCESLTSVQFISTSLISLSLGGCRAITTLDLTCPNLEKVILDGCDHLERASFCPVGLSSLNLGICPKLNTLSIEASFMVSLELKGCGVLSEAFINCPLLTSLDASFCSQLTDDCLSATTVSCPLIESLILMSCSSIGSDGLRSLYCLPNLTVLDLSYTFLVNMQPVFDSCLQLKVLKLQACKYLTDTSLEPLYKGGALPALQELDLSYGTLCQSAIDELLACCTNLTHVSLNGCVNMHDLNWGSSRGQSDNFPAVNTPSMASSNENIPESSEQSTRLLQNLNCVGCPNIRKVAIPLRANCCHLLFLNLSLSANLKEVDVTCLNLCFLNLSNCSSLEILKLECPKLTSLFLQSCNIDEEAVEAAISKCTMLETLDVRFCPKIKLNEHGKITHNLFKFEAYIQQLVNFVTLIKDIRFHSAFIHLD 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00213 919 FunFam F-box/LRR-repeat protein 15 98 347 - -
Pumo10g00213 919 Gene3D Ribonuclease Inhibitor 350 506 IPR032675 -
Pumo10g00213 919 Gene3D Ribonuclease Inhibitor 508 659 IPR032675 -
Pumo10g00213 919 Gene3D Ribonuclease Inhibitor 98 349 IPR032675 -
Pumo10g00213 919 SMART fbox_2 106 146 IPR001810 GO:0005515
Pumo10g00213 919 SUPERFAMILY L domain-like 587 880 - -
Pumo10g00213 919 ProSiteProfiles F-box domain profile. 100 146 IPR001810 GO:0005515
Pumo10g00213 919 SUPERFAMILY RNI-like 385 685 - -
Pumo10g00213 919 MobiDBLite consensus disorder prediction 1 24 - -
Pumo10g00213 919 FunFam F-box/LRR-repeat protein 15 509 657 - -
Pumo10g00213 919 SUPERFAMILY F-box domain 105 136 IPR036047 GO:0005515
Pumo10g00213 919 Gene3D Ribonuclease Inhibitor 660 749 IPR032675 -
Pumo10g00213 919 Gene3D Ribonuclease Inhibitor 750 896 IPR032675 -
Pumo10g00213 919 FunFam F-box/LRR-repeat protein 15 659 744 - -
Pumo10g00213 919 FunFam F-box/LRR-repeat protein 15 349 508 - -
Pumo10g00213 919 SUPERFAMILY RNI-like 127 393 - -
Pumo10g00213 919 CDD F-box_FBXO41 108 147 - -
Pumo10g00213 919 SMART LRR_CC_2 396 421 IPR006553 -
Pumo10g00213 919 SMART LRR_CC_2 666 691 IPR006553 -
Pumo10g00213 919 SMART LRR_CC_2 838 862 IPR006553 -
Pumo10g00213 919 SMART LRR_CC_2 350 375 IPR006553 -
Pumo10g00213 919 SMART LRR_CC_2 719 741 IPR006553 -
Pumo10g00213 919 SMART LRR_CC_2 529 554 IPR006553 -
Pumo10g00213 919 SMART LRR_CC_2 459 483 IPR006553 -
Pumo10g00213 919 SMART LRR_CC_2 303 328 IPR006553 -
Pumo10g00213 919 SMART LRR_CC_2 277 302 IPR006553 -
Pumo10g00213 919 SMART LRR_CC_2 618 643 IPR006553 -
Pumo10g00213 919 SMART LRR_CC_2 592 617 IPR006553 -
Pumo10g00213 919 SMART LRR_CC_2 487 517 IPR006553 -
Pumo10g00213 919 Pfam F-box-like 108 148 IPR001810 GO:0005515
Pumo10g00213 919 PANTHER OS10G0396666 PROTEIN 79 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00213 Pumo-Chr10 2947946 2953534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00213 - - gmx:100786178 1574.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00213 10 2947946 2953534 Pumo10g00213 10 2947946 2953534 ECH