Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00191 ATGGCTAGTGAACGAGATATGTTCTCGGCGGAGATTGTGAACCGTGGAATTGAATCGTCTGGACCCAACGCTGGCTCGTTGACCTTCTCGGTGAGGGTGAGGAGGCGCTTGCCGGATTTTCTTCAATCGGTGAACCTTAAGTACGTGAAATTGGGTTACCATTATCTCATAAACCATGGCATATACTTGTTCACCATACCCGTTCTTCTCGTCGTGTTCAGTGCTGAGGTTGGGAGCCTCAGCAAAGAGGACCTGTGGAAGAAGCTTTGGGAGGACGCGCGTTACGACCTTGCTACGGTTCTCGCTTCCTTTGGGGTCTTCGTTTTCACCTTGTCCGTCTACTTCATGTCGAGGCCACGTCCAATTTACCTCATTGATTTTGCATGTTATAAACCCGATGATGAACTCAAGGTGTCACGGGAGCAGTTGATGGAGGTGGCAAGGAAATCGGGCAAGTTCGACGAAGCGAGTCTGGAGTTCCAGAAGAGGATGCTAATGTCCTCGGGAATCGGCGACGAGACCTACATCCCAAAGGCCGTGATATCCTCCAGCGAAAACACCGCAACAATGAAAGAGGGTCGCGCCGAGGCCTCCATGGTCATGTTCGGAGCACTCGACGAGCTCTTCGAGAAAACCCGCGTCCGACCAAAGGACGTAGGGGTCCTAGTAGTCAACTGCAGCATCTTCAACCCGACACCATCGCTGTCGGCAATGATCATAAACCACTACAAAATGAGGGGGAACATTCTGAGCTACAACCTCGGAGGAATGGGGTGCAGTGCGGGGATCATAGGCGTCGATTTGGCCAAGGATATTCTGCAAGCGAACCCTAATAACTATGCGGTGGTGGTGAGCACCGAAATGGTGGGGTTCAATTGGTACCAGGGGAAGGATAGGTCTATGCTTATTCCGAATTGCTTCTTCCGCATGGGCTGCTCTGCCGTTTTGCTTTCCAACCGTCGTCGGGACTATAACCGCGCCAAGTACCGTCTCGAGCACATTGTTCGCACGCACAAGGGTGCCGATGACCGCAGCTTCAGGTGTGTGTACCAAGAGGAAGATGAGCAAAAACTCAAGGGACTAAAGATCAGCAAAGACTTAATTGAGATTGGTGGGGATGCTCTAAAAACCAACATCACCACACTAGGACCCTTGGTGCTACCCTTTTCTGAGCAACTTCTCTTCTTTGGCACCCTTGTGTGGAGGCACTTATTTGGCAGCAAAAAAGATGGTAACTCACCCTCAATGAAGAAGCCATACATTCCTGACTACAAACTGGCTTTTGAGCACTTCTGTGTGCATGCTGCAAGCAAGACCATTCTTGATGAGCTTCAAAGGAACTTGGAACTGAGTGACAAGAACATGGAGGCATCTAGGATGACACTGCACCGCTTTGGCAACACCTCTAGCAGCAGCATTTGGTATGAGTTGGCTTACATGGAAGCAAAGGAGAGTGTGAGAAGAGGGGACCGTGTTTGGCAACTCGCTTTTGGCTCTGGCTTCAAGTGCAACAGTGTGGTTTGGCGCACCATGCGCCGAGTCACCAAGCCTTCTAGGAACCCTTGGCTTGACTCCATCAACAGATATCCTGCACCTCTCAACAACTAA 1608 0.5068 MASERDMFSAEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLFTIPVLLVVFSAEVGSLSKEDLWKKLWEDARYDLATVLASFGVFVFTLSVYFMSRPRPIYLIDFACYKPDDELKVSREQLMEVARKSGKFDEASLEFQKRMLMSSGIGDETYIPKAVISSSENTATMKEGRAEASMVMFGALDELFEKTRVRPKDVGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIGVDLAKDILQANPNNYAVVVSTEMVGFNWYQGKDRSMLIPNCFFRMGCSAVLLSNRRRDYNRAKYRLEHIVRTHKGADDRSFRCVYQEEDEQKLKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLVWRHLFGSKKDGNSPSMKKPYIPDYKLAFEHFCVHAASKTILDELQRNLELSDKNMEASRMTLHRFGNTSSSSIWYELAYMEAKESVRRGDRVWQLAFGSGFKCNSVVWRTMRRVTKPSRNPWLDSINRYPAPLNN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00191 535 Coils Coil 441 461 - -
Pumo10g00191 535 CDD CHS_like 98 508 - -
Pumo10g00191 535 PANTHER 3-KETOACYL-COA SYNTHASE 100 531 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pumo10g00191 535 Gene3D - 122 510 IPR016039 GO:0016746
Pumo10g00191 535 PIRSF Very_long_ch_3-ktacl-CoA_syn 39 535 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pumo10g00191 535 FunFam 3-ketoacyl-CoA synthase 132 510 - -
Pumo10g00191 535 Pfam FAE1/Type III polyketide synthase-like protein 114 403 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pumo10g00191 535 SUPERFAMILY Thiolase-like 108 325 IPR016039 GO:0016746
Pumo10g00191 535 SUPERFAMILY Thiolase-like 332 510 IPR016039 GO:0016746
Pumo10g00191 535 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 429 509 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00191 Pumo-Chr10 2663881 2668081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00191 2 533 Miscellaneous Gene Families AT2G26250 76.225 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00191 K15397 - gmx:100778487 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00191 10 2663881 2668081 Pumo10g00191 10 2663881 2668081 ECH