Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00183 ATGAGGACGGTGCTTTCGCGCTTGATCCATTCCACGCCTTCCATTTCCAGGCTCAATGCCACGGCAGTGTCAATCAGCGGGAGAAATCTCTGCACAGATTCTAACAAAGTTGATGAGCCCCTCAAAGTTGAAGAAGCAGAGACTGTAAATGTGCCCCCACCCCCAACAGAAAAGTTGCTTGTGTTGGGAGGCAATGGATTTGTTGGATCACACATTTGTCGAGAAGCTTTAGATCATGGTTTGTCTGTTGCGAGTCTTAGCAGATCTGGTAGGTCATCCCTGCACGACTCCTGGGCTAGCAATGTTGCTTGGTATAAAGGGAATCTCCTTTCAACTGATTCATTGAAAGAAGCTCTGAATGGGGTCACTGCTGTTATCTCATGTGTCGGTGGTTTTGGCTCCAACTCGTACATGTACAAAATTAATGGGACTGCTAACATCAATGCAATTAGAGCAGCTTCAGAACAAGGTGTTAAAAGATTTGTCTATATCTCTGCGGCTGACTTTGGTGTAGTAAATTACTTACTGCAGGGGTATTATGAAGGAAAGAAAGCTGCTGAAACAGAGCTCCTGACCAGATTTCCGTATGGAGGAGTAATTCTGAGGCCAGGTTTTATTTATGGGACTCGAAGTGTTGGGAGTATGAAGATACCCCTTGGTGTAATTGGATCTCCATTGGAAATGGTACTCCAAGTTGCTAAACCATTGAACCAGATCCCACTTGTTGGGCCTCTATTGACACCTCCTGTCAATGTTACTGCCGTGGCAAAAGTTGCTGTTAGAGCTGCTACTGATCCTGTTTTTCCGCCGGGGATCATAGATGTTTATGGAATGCAACGTTACAGTCAGCATAAATCAAACTAG 864 0.4502 MRTVLSRLIHSTPSISRLNATAVSISGRNLCTDSNKVDEPLKVEEAETVNVPPPPTEKLLVLGGNGFVGSHICREALDHGLSVASLSRSGRSSLHDSWASNVAWYKGNLLSTDSLKEALNGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEQGVKRFVYISAADFGVVNYLLQGYYEGKKAAETELLTRFPYGGVILRPGFIYGTRSVGSMKIPLGVIGSPLEMVLQVAKPLNQIPLVGPLLTPPVNVTAVAKVAVRAATDPVFPPGIIDVYGMQRYSQHKSN 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00183 287 Pfam NAD(P)H-binding 63 206 IPR016040 -
Pumo10g00183 287 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 58 278 IPR036291 -
Pumo10g00183 287 FunFam Uncharacterized protein, chloroplastic 52 279 - -
Pumo10g00183 287 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED 28 283 - -
Pumo10g00183 287 Gene3D - 50 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00183 Pumo-Chr10 2552292 2558974 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00183 - - gmx:100791278 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00183 10 2552292 2558974 Pumo10g00183 10 2552292 2558974 ECH