Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00172 ATGGCGTTGGTGAATCCGTTTCTGTCTCCCACTCGAACTTCCCTACCTCTGCGAGTTTCAGCTCCACCAAACCAAGTCCTACGTTGGACTCTCTACTCCCATTCATTCAAACCATCACTAAGGTCGAAGCACGCAAGGTGTGGCGCCACTGCAGACATCAAAGCTGCACCTGTAGTTGATGGGGAAGCAGATCACGCGGTTCTTGTGGGTCCCGCCAGCGAGGAGGAGCGAAAAGGGGACTATGACTGGACACAGGAATGGTACCCTTTGTATCTCACTCAGAATGTGCCCGAAGATGCACCCTTGGGTCTCAGAGTGTTTGATAAACACCTCGTGTTGTTCAAGGATGGCAATGGCCAATTTCGCTGTTATGAAGATCGCTGCCCCCACAGGTTAGCAAAATTATCTGAGGGACAGTTGATTGATGGAAGGCTTGAGTGTTTATACCATGGATGGCAATTTGAAGGGGAGGGCAAATGTGTGAAGATACCTCAGCTTCCAGCTGATGCCAAAATCCCTAGGGCAGCTTGTGTTAAAACATATGAAGTGAGGGACTCTCAAGGTGTTATTTGGGTGTGGATGTCCCTCAAGACACCTCCAAATGTTAGTAAATTACCTTGGTTTGAGAACTTTGCAAGGCCGGGGTTTCAAGATGTTTCAACAACTCATGAACTCCCTTATGATCACTCTATTCTTCTGGAGAACCTGATGGATCCTGCTCATATCCCAATCTCACATGACAGAACAGATTGGACTGCAAAAAGGGAGGATGCTCAGCCGCTGTGTTTTGAGGTGACTGAACGAACTGATAGAGGGTTTGCAGGTTGGTGGGGCAGAGAGAAAGATGGATCCAAGCCTAACTTCTTGCGGTTTGAGGCTCCTTGTGTTCTACAAAACAACAGGGAAATTGTTGATAAGGATGGTGAAATAAACTACTTCAGTGGCCTGTTCCTTTGTAGACCAACTGGGCAAGGGAAATCCATGCTTATAGTGAGGTTTGGAGGAACAAAAAGATCTCCACTAGCAAAAGTGTTTCCTAAGTGGTACTTCCATCAGAATGCAAGCAAGGTGTTTGAGCAAGACATGGGATTCTTGTCATCCCAGAATGAAATTCTCTTGAAAGAGAAGGTTCCAACAAAGGAACTATACCTGAATCTGAAATCATCAGACACATGGGTTGCTGAATACAGGAAGTGGATGGACAAAGCAGGGCATGGGATGCCATATCATTTTGGTCACAGCACTATCTCTTTGCCCAAAGAGCCTGCTGTGGTTGAACATGCACCTGCTGGACTCGTTGCAGGACAATCAGCTTCCTCACCTACCAAGGGGGGCATTGGAACAATGTATGCACCAAATTTAGCCAACAGATATTTTAGGCATGTGATTCATTGCAAAGGATGTAGAACTGTAGTCAAAGCTTTTGAAACTTGGAAAAATGCCCTTTCAGCTGTGGCAGTTGCTTTAGCTGCACTGGCAATTCTGGTATCTGGGAGACAATGGAAAGCCCTTCTCTTGGCATCTGCAGCTCTGTGCTCTGTTGGAGTCTATGCTTGCTCAACAGCCATTGCAATGAATACAACAAACTTTATTAGGACACATAGGAGATTGTGA 1614 0.4622 MALVNPFLSPTRTSLPLRVSAPPNQVLRWTLYSHSFKPSLRSKHARCGATADIKAAPVVDGEADHAVLVGPASEEERKGDYDWTQEWYPLYLTQNVPEDAPLGLRVFDKHLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRAACVKTYEVRDSQGVIWVWMSLKTPPNVSKLPWFENFARPGFQDVSTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEVTERTDRGFAGWWGREKDGSKPNFLRFEAPCVLQNNREIVDKDGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPLAKVFPKWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKAGHGMPYHFGHSTISLPKEPAVVEHAPAGLVAGQSASSPTKGGIGTMYAPNLANRYFRHVIHCKGCRTVVKAFETWKNALSAVAVALAALAILVSGRQWKALLLASAALCSVGVYACSTAIAMNTTNFIRTHRRL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00172 537 Pfam Rieske [2Fe-2S] domain 86 168 IPR017941 GO:0051537
Pumo10g00172 537 SUPERFAMILY Bet v1-like 188 406 - -
Pumo10g00172 537 Pfam Pheophorbide a oxygenase 291 376 IPR013626 GO:0010277
Pumo10g00172 537 Gene3D - 214 405 - -
Pumo10g00172 537 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 87 192 IPR017941 GO:0051537
Pumo10g00172 537 Gene3D - 82 210 IPR036922 GO:0051537
Pumo10g00172 537 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 50 485 - -
Pumo10g00172 537 SUPERFAMILY ISP domain 77 200 IPR036922 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00172 Pumo-Chr10 2430297 2432801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00172 - - gmx:100818625 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00172 10 2430297 2432801 Pumo10g00172 10 2430297 2432801 ECH