Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00171 ATGAGTAGGTGTGTATCTTGTAGTAGCGGGTCTGCGCTGATTCTCAACAAGAGTTTGTTGATATCACCAATTCATAATGCCGTAAAGGTGAGGGGAAACAGTAGTAGAAGTTGTCGCCTGCGCGTCCAGGTTTCTATGGTGGACTCTTCCTCCGCTGATTTCACCAGGCGCATCGAACGAGCCTGGTTAATTTCTAAGCAACCAAGGCCAATCGTGTGTTCATCTTGCAACACAAAAGGGCATATTGAATGTAAATGGTGTGCGGGTACTGGTTTTTTTATTCTTGGTGATAACATGCTTTGTGAAGTCCCATCCAGAAACACTACCTGTATTATTTGCACTGGAAAGGGATCAATGTGCTGTTCTGATTGTCAAGGAACAGGCTTTCGTGCAAAGTGGTTGGGAGAACCTCCTACTTCCTAG 423 0.4515 MSRCVSCSSGSALILNKSLLISPIHNAVKVRGNSSRSCRLRVQVSMVDSSSADFTRRIERAWLISKQPRPIVCSSCNTKGHIECKWCAGTGFFILGDNMLCEVPSRNTTCIICTGKGSMCCSDCQGTGFRAKWLGEPPTS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00171 140 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 36 129 - -
Pumo10g00171 140 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 71 130 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00171 Pumo-Chr10 2427659 2429717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00171 - - gmx:100820231 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00171 10 2427659 2429717 Pumo10g00171 10 2427659 2429717 ECH