Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00160 ATGGCGTTTTGGAGATCTCTCGCGTTCTCTGCGGTTCTTCTGCTTCTCATCCATGGCGCTCACTGCTTCTACCTCCCCGGCGTCGCTCCACAGGACTTCCAGAAGGGAGATCCATTGCAAGTGAAAGTAAATAAATTAACATCAACAAAGACCCAGCTTCCATATTCATATTATTCACTTCCCTATTGTCCCCCGTCAAAAATACAGGATAGTGCAGAAAATCTTGGGGAAGTGCTTCGTGGTGACCGCATTGAAAATTCTCTTTATGTGTTTAAAATGCGTGAGCCACAAATGTGCAATATTGTGTGTAATCTTAAACTTGATGCTAAAACTGCTAAGGAGTTTAAAGAGAAGATCAGTGATGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCCTTGAAACGGACTGATCAGGATTCAACTGTCTATCAGCTTGGTTTCCATGTTGGACTCAAAGGGCAGTATACTGGGAGCAAGGAGGAGAAATATTTTATTAACAACCATTTGGCATTTACTGTCAAGTACCATAGAGATGTGCTAACTGAATCTGCTAGAATTGTGGGCTTTGAGGTTAAGCCATTCAGTGTTAAACATGAATACGAAGGTAAATTTGATGTAAAAACTACCCGTTTGACAACCTGTGACCCTCATGCTAAACACACAGTTGTCAACTCCAACAATCCCCAAGAGGTTGAAGAGGGCAAGGAAATTATCTTCACATATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTAATGAATGATGATCAAATCCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTCCTTTCGGGCATGGTGGCAATGATTATGCTGAGGACACTGTACCGTGACATTGCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCCCAAGAGGAGACTGGTTGGAAGCTTGTACATGGTGATGTATTTAGGCCCCCCAACAACTCAGATTTGCTGTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGCATGATACTAGTAACCATGATATTTGCTGTCCTTGGGTTCCTTTCTCCTTCAAACCGAGGTGGGCTGATGACAGCCATGCTCTTGCTTTGGGTTTTCATGGGAATATTTGCTGGGTACTCATCAACTCGCTTGTACAAAATGTTCAAAGGGTCGGAGTGGAAAAAAATTGCCCTCAGGACTGCAACTGTGTTCCCTGCAGTTGTGTCTGCCATTTTCTTTGTTTTAAATGCTCTCATATGGGGCCAAAAATCATCTGGAGCTGTGCCATTCGGGACAATGTTTGCTCTGATCTTTTTATGGTTTGGTATCTCGGTTCCACTTGTTTTTGTGGGTAGCTATGTTGGATTCAAGAAGCCTGCAATTGAGAATCCTGTGAAAACGAACAAGATCCCAAGGCAGATCCCTGAGCAGGCGTGGTACATGAACCCAGTTTTCTCAGTTCTGATTGGTGGAATACTCCCATTTGGAGCTGTTTTCATCGAGCTTTTCTTCATCCTCACCTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGATTCCTCTTTTTGGTCTTCATCATCCTCATTGTCACTTGTGCTGAAATAACCATTGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCATACCTTACCTCTGGTTCCTCTGCACTCTACCTCTTTCTTTATGCAACTTTCTACTTCTTCACCAAGCTTGAAATCACAAAGCTGGTATCTGCGATATTTTACTTCGGGTACATGCTCATAGCGTCTTATGCATTTTTCGTGGTAACCGGTACCATCGGATTTTATGCATGCTTTTGGTTCACTAGGCTCATCTACTCCTCAGTCAAAATTGATTAG 1911 0.4275 MAFWRSLAFSAVLLLLIHGAHCFYLPGVAPQDFQKGDPLQVKVNKLTSTKTQLPYSYYSLPYCPPSKIQDSAENLGEVLRGDRIENSLYVFKMREPQMCNIVCNLKLDAKTAKEFKEKISDEYRVNMILDNLPLVVPLKRTDQDSTVYQLGFHVGLKGQYTGSKEEKYFINNHLAFTVKYHRDVLTESARIVGFEVKPFSVKHEYEGKFDVKTTRLTTCDPHAKHTVVNSNNPQEVEEGKEIIFTYDVEFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDIAKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMILVTMIFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYSSTRLYKMFKGSEWKKIALRTATVFPAVVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAIFYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00160 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 22 636 IPR004240 GO:0016020
Pumo10g00160 636 Pfam Endomembrane protein 70 54 592 IPR004240 GO:0016020
Pumo10g00160 636 SUPERFAMILY MFS general substrate transporter 276 460 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00160 Pumo-Chr10 2355648 2359776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00160 8 636 Miscellaneous Gene Families AT5G10840 85.261 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00160 K17086 - gmx:100780976 1216.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00160 10 2355648 2359776 Pumo10g00160 10 2355648 2359776 ECH
Pumo9g00504 9 8044316 8048476 Pumo10g00160 10 2355648 2359776 PCT