Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00158 ATGAGACACACTCCGAGGATTGGTGTTCATAGTGTCTTTGTGTGTTATAATATATTTGTGGTGTTGTTGAGCAGTGTATGTGCATCATCATCATCCTCTCACCACTGTAAAGCATGGTTAGTGCAATCCATCCCCACCAATATGCCCCACCTATCCCATGTTCCTGGCATCCTCTCTACTGGGGATGTGCTTCGGTGGCTGGCTGCAAACTCCACCACGAGGCTTCACATAATTGCCCAGTACTGGCAGCTGTTACCTTCTCCCAACGATCCTCGCTCTGGGGACTATGGTTTCACTCAACATCAGATGCATGAATTTGGTGCCGATCAAGGTGTTGCCCTTTATCAAGCATTAGATGCTGCTGCTGACCGTAATGTTAGCATTAGGTTACTGTCCCACTCTGGAGTGTATCCAACTTTTGCCTCAGAACCATCCAAACTTGCTTTCGGAAGGCCAAATGTTGAGAATGTGACATTGCTACTAAAGGATTGGTGGGGCTTGGGCATTGTCCATGCCAAAGTTTGGATATCTGATAGTAGGGATGTGTATATTGGATCTGCAAACAATGACTGGAAGTCTCTTACGCAGGTCAAGGAACTTGGAATTTATTTTGCTGATTGTCCTGAAATAGCTAAAAAGGTTGAGGTCTACTTTGACAATTTATGGACACTAGCATCTCTTAATTCATCAGCTTACACAAAAACAGTGTTTGATCAAGAATGGCAAGTTGAGAGAAAGGTTCCCTGCTGGTCGCATTTCATTGATCATAGAGAGAGGTGCAAGTCACCTCTTCCTCAATATCTGGAGACTCCTCATGTTGCAGGATATCCTATTCTGTCTGACCCTTATATGTTAAAGGTTTCATTTCAAACTCCACGGAGTAACTATTCAACAAAGCACCCCCAAGTCAGCTATCTATCCTTTGCACCCCCAGAGCTATCATTTGGCAAATATCAGGCTGATGAGCAAGCATGGATTGATACAATTAAGTCTGTTGGAAAGAAGGGAACAGTTAGAATCAGTACCATGGACTGGCTAGGTCAGTCAGAATTTATGGACCAAACAATTTACTGGTCATCCCTATCCTCTGCAATATCACAGGTGGTGTTTTCCAAGAATGCAACAGTGCAGATATTGGTGGCATATTGGGCACACTCCATCAATAACACAGATGTGTACCTCAAGTCTCTCCTCTACACCAACAATCTCTGCTCTTCCTCAAAATACAACACATGCTCTGGGAAAGTTGAGATAAAATATTATGTGGTTCCAGGTTTCAACATGACAGGACCTGCCATTAAGGGTGGAACTAGAACAGGAAACATATACCCTGATTTTACAAGAGTGAATCATGGAAAATATGCAGTTAGTGATGTAAGGGCACATATTGGGACTAGCAATCTTGTATGGGACTACTTCTACACAACAGCAGGTGTCAGTTTTGGGACACACAACACTGCCATCATCTCTCAACTTAGGGAAATTTTTAATGCTGATTGGAACTCACCCTATGCTGTTCCATTTGAAGAGCTGGATACAAGAAGTTCAATCTAA 1554 0.4305 MRHTPRIGVHSVFVCYNIFVVLLSSVCASSSSSHHCKAWLVQSIPTNMPHLSHVPGILSTGDVLRWLAANSTTRLHIIAQYWQLLPSPNDPRSGDYGFTQHQMHEFGADQGVALYQALDAAADRNVSIRLLSHSGVYPTFASEPSKLAFGRPNVENVTLLLKDWWGLGIVHAKVWISDSRDVYIGSANNDWKSLTQVKELGIYFADCPEIAKKVEVYFDNLWTLASLNSSAYTKTVFDQEWQVERKVPCWSHFIDHRERCKSPLPQYLETPHVAGYPILSDPYMLKVSFQTPRSNYSTKHPQVSYLSFAPPELSFGKYQADEQAWIDTIKSVGKKGTVRISTMDWLGQSEFMDQTIYWSSLSSAISQVVFSKNATVQILVAYWAHSINNTDVYLKSLLYTNNLCSSSKYNTCSGKVEIKYYVVPGFNMTGPAIKGGTRTGNIYPDFTRVNHGKYAVSDVRAHIGTSNLVWDYFYTTAGVSFGTHNTAIISQLREIFNADWNSPYAVPFEELDTRSSI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00158 517 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 446 472 IPR001736 GO:0003824
Pumo10g00158 517 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 166 193 IPR001736 GO:0003824
Pumo10g00158 517 PANTHER PHOSPHOLIPASE D - RELATED 31 511 - -
Pumo10g00158 517 SUPERFAMILY Phospholipase D/nuclease 67 224 - -
Pumo10g00158 517 Gene3D Endonuclease Chain A 295 503 - -
Pumo10g00158 517 SUPERFAMILY Phospholipase D/nuclease 302 514 - -
Pumo10g00158 517 Gene3D Endonuclease Chain A 60 226 - -
Pumo10g00158 517 SMART pld_4 446 472 IPR001736 GO:0003824
Pumo10g00158 517 SMART pld_4 166 193 IPR001736 GO:0003824
Pumo10g00158 517 CDD PLDc_vPLD3_4_5_like_2 305 501 - -
Pumo10g00158 517 Pfam PLD-like domain 112 222 IPR025202 -
Pumo10g00158 517 CDD PLDc_vPLD3_4_5_like_1 40 207 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00158 K16860 - gmx:100778897 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00158 10 2342113 2346184 Pumo10g00158 10 2342113 2346184 ECH