Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00139 ATGTCGATTTTACCGAAAGGCGATTCGGTTCAAATCAGGGAGGTTTGGAACGATAACCTCGAAGAGGAGTTCGCTTTGATCCGCGAAATCGTCGACGAGTACAACTACGTGGCGATGGATACCGAGTTCCCCGGCGTGGTTCTCCGTCCGGTGGGGAATTTCAAGAACATAAACGACTACAACTACCAAACCTTGAAGGACAACGTCGACATGTTGAAGCTGATCCAATTAGGTCTCACCTTCTCCGACGAGAACGGAAACCTCCCTACCTGCGGCACGGAGAACCCCTGCATCTGGCAATTCAACTTCCGCGAGTTCAACATCAGCGAAGACATCTTCGCAAGCGATTCGATCGAGCTGTTGCGCCAGTGCGGGATCGACTTCAAGAAGAACAGCGAGAAAGGAATCGACGTGAACCGGTTCGGGGAGCTTCTCATGTCCTCCGGAATCGTGTTGAACGACGCCGTGCACTGGGTAACCTTCCACAGCGGCTACGATTTCGGTTACCTCCTGAAGCTGTTGACATGCCGAAGCTTGCCGGATACGCAGGCCGGGTTCTTCGATCTGATCAAGATGTATTTTCCGATGGTGTATGATATCAAGCACCTGATGAAGTTCTGCAACAGCCTCCATGGTGGTTTGAACAAGCTTGCGGAGTTGTTGGAGGTGGAGAGGGTTGGTGTGTGCCATCAGGCTGGGTCTGATAGTTTACTCACTTGTTGTACATTTAGAAAGTTGAGGGATACATTCTTCAATGGCTCCACGGAGAAATATGCTGGTGTCTTGTATGGTTTAGGTGTTGAGAGTGGACAGACTAATTGA 822 0.5036 MSILPKGDSVQIREVWNDNLEEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTENPCIWQFNFREFNISEDIFASDSIELLRQCGIDFKKNSEKGIDVNRFGELLMSSGIVLNDAVHWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLIKMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTCCTFRKLRDTFFNGSTEKYAGVLYGLGVESGQTN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00139 273 FunFam Putative CCR4-associated factor 1 7 2 269 - -
Pumo10g00139 273 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 266 IPR039637 GO:0004535|GO:0030014
Pumo10g00139 273 Gene3D - 2 268 IPR036397 GO:0003676
Pumo10g00139 273 Pfam CAF1 family ribonuclease 15 136 IPR006941 -
Pumo10g00139 273 SUPERFAMILY Ribonuclease H-like 12 265 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00139 Pumo-Chr10 2115725 2116546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00139 K12581 - gmx:100785970 550.821