Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00095 ATGAAGCAAGCTTCGTCGGAGGCAGTTCCGTCGCTATCCTCGGCGCCGTCGTTCACGGAGGCGGCGACATCGTCGACGTCGTCGGCGGCGGCGGCGGAGGACCTGGCGGTGGGGTCGCGGGACGGCGGGGGAGGCGCTCAGGAGACGGTGGCGGTGGATCGGCGAGGCGAGTACTCGGCGGTGTGCCGATGGACGGTGCACAATTTCCCTCGAATAAAGGCTAGGGCACTGTGGAGCAAGTACTTCGAGGTAGGCGGTTACGATTGTCGGTTGCTAATATACCCGAAGGGTGACTCACAGGCGCTTCCAGGTTACATATCCATTTACCTCCAAATCATGGACCCTCGCGGCACCTCTTCCTCCAAATGGGACTGTTTCGCCAGCTATCGCTTGGCAATCGTCAACCTCGCCGACGATTCCAAAACCATTCACCGCGATTCCTGGCACCGATTCTCCAGCAAGAAGAAATCGCACGGCTGGTGCGATTTCACCCCCTCCAACACTGTTTTCGACCCCAAATTGGGATACCTCTTCAACACCGATTCCGTTTTGATCACCGCCGATATCCTCATTCTCAACGAGTCCGTCAATTTCACGCGCGACAACAATGAGGTCCAGTCCTCCTCTTCCTCCTCCTCCAATGCAATGACTTCCTCCGTGGTCGCCGGTCCTGTCTCTGATGTGTTGAGTGGGAAGTTCACTTGGAAAGTGCATAATTTCAGTTTGTTCAAGGAGATGATCAAGACGCAGAAGATAATGAGCCCGGTTTTCCCTGCTGGGGAGTGTAATTTGAGGATTAGTGTGTACCAGAGCTCCGTGAATGGGGTTGAGTATTTGTCTATGTGTTTGGAGAGCAAGGACACGGATAAGACTGTGGTCTTGTCTGATAGGAGTTGTTGGTGTTTGTTTAGGATGTCTGTCTTGAACCAGAAGCCTGGTTCCAATCACATGCATAGGGATTCCTATGGGAGGTTTGCCGCGGATAATAAGAGTGGTGACAATACCAGCTTGGGATGGAATGATTATATGAAGATGTCGGATTTTATTGGCGCGGATTCGGGGTTCTTGGTGGATGACACTGCGGTTTTTAGCACCTCATTTCATGTGATCAAGGAGTTTAGCAGCTTCTCCAAGAATGGGGCTGTCATTGCCGGGAGGAGTGGGAGTGGTGCAAGGAAGTCTGACGGGCATATTGGAAAGTTCACTTGGAGGATTGAGAATTTTACTAGGTTGAAGGATTTGCTGAAGAAGAGGAAAATCACGGGTCTGTGCATCAAGAGCAGGAGGTTTCAGATTGGTAATAGGGATTGTCGACTTATTGTTTACCCTAGAGGGCAGTCTCAGCCACCATGCCACCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTTAGTCATCGTTTGTCAGTTGTGAACCAGAGGATGGAGGATAAATCCGTCACCAAGGAATCTCAGAACCGCTACTCTAAAGCTGCGAAGGATTGGGGTTGGCGTGAATTTGTGACACTTACCAGTCTCTTTGATCAAGATTCAGGTTTTCTTGTCCAGGACACTGTCATATTCTCTGCTGAAGTTCTTATATTGAAAGAGACATCAATAATGCAGGATTTTACTGAGAACGAGTCTGAGTTAAGCAGCAGTGGCTCCCCTGTTGATAGTTATGGGAAAAGAAGTTCATTTACATGGAAAGTGGAGAATTTCCTTTCTTTTAAGGAAATAATGGAGACTCGAAAAATCTTCAGTAAATTCTTTCAGGCTGGTGGATGTGAACTTCGGATTGGTGTATACGAGTCGTTTGACACCATATGTATTTATTTAGAGAGTGACCAGGCTGTTGGTAGTGACCCGGATAAAAACTTCTGGGTCAGATACAGGATGGCAGTTGTGAATCAAAAGAACCCAGCCAAAACAGTGTGGAAAGAATCTTCTATCTGCACAAAGACATGGAATAATTCAGTTTTGCAATTCATGAAGGTGTCTGATATGTTAGAAGCAGATGCAGGATTTCTTGTACGTGACACTGTTGTTTTTGTATGTGAAATATTGGATTGCTGCCCTTGGTTTGAGTTTTCAGATTTAGAGGTTTTAGCATCAGAGGATGATCAAGATGCATTGACTACTGATCCTGATGAGCTCATTGACTCTGAAGACAGTGAAGGGATAAGTGGAGACGAGGAAGATATTTTCAGAAATCTTCTTTCCAGAGCTGGATTCCATTTAACATATGGAGATAATCCTTCACAGCCACAGGTTACTTTAAGGGAGAAACTTCTAATGGATGCTGGTGCAATTGCGGGGTTTCTGACTGGTCTTCGAGTTTATCTTGATGATCCTGCAAAAGTTAAGCGTCTGCTTCTACCTACCAAGCTCTCTGGTAGTTGTGATGGGAAGAAGGCCACCAAAGCTGATGAATCTTCCCCAAGTTTGATGAATTTGCTGATGGGAGTTAAAGTCTTGCAGCAAGCAATCATTGATTTACTATTGGATATAATGGTTGAGTGTTGCCAACCTTCCGAAGTGGGTCCTGTTGCTGATTCTGTTGATGCATGCTCTAAACCTTCTCCAGATGGAAGTGGAGCTGCAAGTCCTCTTGAGTGTGAAAGAGAAAATGGAGCAATGGAGTCTGCTCGAGTTCCCATTTGTGAGAGGTTGGATTCTGTTGTTCAAGAAAGCAGTAATGCATCTGCTGTGCAGAGCTCTGATTTAAAAGGCAATGGTATTCAGGAAAAAGCGCTACCTGGACAGCCCATTTGTCCGCCAGAGACATCTGCCACTGCTTCAGAAAATGCATCCCTTCGTTCAAAGACCAAGTGGCCAGAACAGTCGGAGGAGCTCTTAGGTTTGATTGTAAACTCACTAAGAGCTTTGGATGGGGCTGTTCCACAAGGCTGTCCAGAACCAAGACGGCGACCTCAGTCTGCACAAAAAATTGCTCTTGTATTGGACAAGGCTCCTAAGCATTTACAAGCAGACCTAGTTGCTCTGGTGCCCAAATTGGTTGAGCAGTCAGAACACCCACTGGCTGCCTGTGCACTTCTTGAGCGACTTCAAAAGCCAGATGCAGAACCTGCTTTACGAATACCTGTTTACGGGGCTCTTAGTCAATTGGAGTGTGGTAGTGAAGTGTGGGAACGCATTCTGTTTCAGTCATTTGAGCTTTTGACAGACTCAAATGATGAACCCCTAGCTGCAACAATAGATTTTATATTCAAAGCCGCATCTCAATGTCAACACCTCCCTGAAGCAGTTAGATCTGTTCGTGTCAGGCTGAAAAATCTAGGTCTTGAGGTGTCGCCTTGCGTCCTTGACTTTTTGAGTAAGACTATAAATAGTTGGGGGGATGTTGCTGAAACCATACTTAGGGACGTTGACTGTGACGATGATTATGGTGACAGTTGCTCAGCTCTGCCATGTGGGATTTTCTTATTTGGTGAACACGGCACTGGTCCCAGTGGACTGCATGTGATTGATGAGCAGGCTTATCATGCTAGTCATCATTTTTCTGATATTTATATACTGTTTGAAATGTTATCTATTCCTTGCCTTGTTGCTGAAGCTTCTCAAACATTTGAGAGAGCTGTAGCCCGAGGTGCAATAAGTGCTCAGTCTGTAGCCCTGGTTTTGCAAAGCCGTCTTTCCCAAAGATTGAACAATAATGGCAGCTATGTTTCTGAAAATTTCCAACATTCAGATGGTGCTACAGAGGGAGATGCCTGTGAGCAATTGGGAGTTCAAAGGGATGATTATACTTCTGTTCTTGGTCTTGCTGAAAATTTGGCCCTCTCTAGAGACCCATGCGTGAAAGAATTTGTGAAACTGCTCTACATGATAATGTTTAGATGGTTTGCCAATGAATCTTATCGGGGGAGGATGCTGAAGAGGCTTGTTGACCGTGCCACTAGCAATACTGACAATGGTCGTGAAGTAGATTTTGATTTGGATATCTTGGTTACTTTGGTCTGTGAGGAGCAGGAGTTTATCAGGCCTGTTTTGAGTATGATGCGTGAAGTTGCTGAACTTGCAAATGTTGATCGGGCTGCTCTATGGCACCAGTTATGTGCTAGTGAAGATGAAATTATGCGCGTTCGTGAAGAAAGCAAAACTGAGATTTCTAATATGGCTAAGGAAAAAGCTATGATATCGCAAAAGCTGAGTGAATCTGAGGCCACAAACAATCGTCTGAAGTCTGAAATGAGGGCTGAGATGGATCGGTTTTCTCGGGAAAAGAAGGAACTAGCAGAACAAATTCAAGAAGTTGAGAGTCAGCTTGAATGGATCCGCTCAGAACGGGATGATGAAATTGCAAAGCTCTCTGCTGAGAAGAAAACTCTTCATGACCGTTTACATGATGCAGAGACACAACTTTCTCAGTTGAAGTCTCGGAAACGTGATGAATTAAAGAAAGTAGTCAAGGAGAAAAATGCTCTTGCTGAAAGATTGAAGAATGCTGAAGCTGCACGCAAGAGATTTGATGAAGAACTGAAAAGATTTGCAACAGAGAATGTGACTCGGGAAGAAATCCGGCAATCACTCGAAGATGAAGTCCGTAGATTGACTCAAACAGTTGGGCAAACTGAAGGGGAAAAGCGGGAGAAGGAAGAGCAGGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAGTTGCAAGCTTGCCAGCAATATATTCACACACTTGAGGCCTCACTCCAGGAGGAAATGTCAAGACATGCCCCTCTGTATGGTGCTGGTCTGGAGGCTTTATCATTGAAAGAGTTGGAAACACTATCACGTATTCATGAAGATGGGCTTAGGCAGATCCATGCCCTTCAACAGCGTAAAGGGAGTCCTGCTGGGAGCCCTCTTGTGAGTCCCCATGCTCTCCCTCACACCCATGGATTATATCCAACTGCGTCACCCCCAATGGCCGTCGGACTGCCTCCCTCAATCATCCCAAATGGTGTAGGGATCCACAGCAACGGCCATGTCAATGGTGGTGCAGTTGGACCCTGGTTTAATCACTCTTGA 5037 0.46 MKQASSEAVPSLSSAPSFTEAATSSTSSAAAAEDLAVGSRDGGGGAQETVAVDRRGEYSAVCRWTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNLADDSKTIHRDSWHRFSSKKKSHGWCDFTPSNTVFDPKLGYLFNTDSVLITADILILNESVNFTRDNNEVQSSSSSSSNAMTSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVVLSDRSCWCLFRMSVLNQKPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGADSGFLVDDTAVFSTSFHVIKEFSSFSKNGAVIAGRSGSGARKSDGHIGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTENESELSSSGSPVDSYGKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASEDDQDALTTDPDELIDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGSCDGKKATKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEVGPVADSVDACSKPSPDGSGAASPLECERENGAMESARVPICERLDSVVQESSNASAVQSSDLKGNGIQEKALPGQPICPPETSATASENASLRSKTKWPEQSEELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKIALVLDKAPKHLQADLVALVPKLVEQSEHPLAACALLERLQKPDAEPALRIPVYGALSQLECGSEVWERILFQSFELLTDSNDEPLAATIDFIFKAASQCQHLPEAVRSVRVRLKNLGLEVSPCVLDFLSKTINSWGDVAETILRDVDCDDDYGDSCSALPCGIFLFGEHGTGPSGLHVIDEQAYHASHHFSDIYILFEMLSIPCLVAEASQTFERAVARGAISAQSVALVLQSRLSQRLNNNGSYVSENFQHSDGATEGDACEQLGVQRDDYTSVLGLAENLALSRDPCVKEFVKLLYMIMFRWFANESYRGRMLKRLVDRATSNTDNGREVDFDLDILVTLVCEEQEFIRPVLSMMREVAELANVDRAALWHQLCASEDEIMRVREESKTEISNMAKEKAMISQKLSESEATNNRLKSEMRAEMDRFSREKKELAEQIQEVESQLEWIRSERDDEIAKLSAEKKTLHDRLHDAETQLSQLKSRKRDELKKVVKEKNALAERLKNAEAARKRFDEELKRFATENVTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSLKELETLSRIHEDGLRQIHALQQRKGSPAGSPLVSPHALPHTHGLYPTASPPMAVGLPPSIIPNGVGIHSNGHVNGGAVGPWFNHS 1678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00095 1678 Gene3D - 1434 1627 - -
Pumo10g00095 1678 PANTHER TRAF-LIKE FAMILY PROTEIN 25 1678 - -
Pumo10g00095 1678 ProSiteProfiles MATH/TRAF domain profile. 59 189 IPR002083 GO:0005515
Pumo10g00095 1678 Pfam MATH domain 579 686 IPR002083 GO:0005515
Pumo10g00095 1678 Pfam MATH domain 68 191 IPR002083 GO:0005515
Pumo10g00095 1678 Pfam MATH domain 430 536 IPR002083 GO:0005515
Pumo10g00095 1678 SUPERFAMILY TRAF domain-like 567 691 - -
Pumo10g00095 1678 MobiDBLite consensus disorder prediction 904 946 - -
Pumo10g00095 1678 CDD MATH 231 363 IPR002083 GO:0005515
Pumo10g00095 1678 MobiDBLite consensus disorder prediction 1 29 - -
Pumo10g00095 1678 MobiDBLite consensus disorder prediction 1614 1636 - -
Pumo10g00095 1678 CDD MATH 399 534 IPR002083 GO:0005515
Pumo10g00095 1678 MobiDBLite consensus disorder prediction 929 945 - -
Pumo10g00095 1678 Coils Coil 1443 1509 - -
Pumo10g00095 1678 SUPERFAMILY TRAF domain-like 228 373 - -
Pumo10g00095 1678 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 390 543 IPR008974 GO:0005515
Pumo10g00095 1678 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 555 692 IPR008974 GO:0005515
Pumo10g00095 1678 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 226 373 IPR008974 GO:0005515
Pumo10g00095 1678 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 45 196 IPR008974 GO:0005515
Pumo10g00095 1678 SUPERFAMILY TRAF domain-like 399 540 - -
Pumo10g00095 1678 Coils Coil 1386 1438 - -
Pumo10g00095 1678 ProSiteProfiles MATH/TRAF domain profile. 566 690 IPR002083 GO:0005515
Pumo10g00095 1678 CDD MATH 63 189 IPR002083 GO:0005515
Pumo10g00095 1678 CDD MATH 568 690 IPR002083 GO:0005515
Pumo10g00095 1678 ProSiteProfiles MATH/TRAF domain profile. 398 534 IPR002083 GO:0005515
Pumo10g00095 1678 SUPERFAMILY TRAF domain-like 58 197 - -
Pumo10g00095 1678 Coils Coil 1517 1544 - -
Pumo10g00095 1678 SMART math_3 235 348 IPR002083 GO:0005515
Pumo10g00095 1678 SMART math_3 61 169 IPR002083 GO:0005515
Pumo10g00095 1678 SMART math_3 403 515 IPR002083 GO:0005515
Pumo10g00095 1678 SMART math_3 571 671 IPR002083 GO:0005515
Pumo10g00095 1678 ProSiteProfiles MATH/TRAF domain profile. 230 367 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00095 Pumo-Chr10 1633580 1643405 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00095 - - gmx:100788511 3211.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00095 10 1633580 1643405 Pumo10g00095 10 1633580 1643405 ECH